| Sequence 1: | NP_524453.1 | Gene: | Dcr-1 / 42693 | FlyBaseID: | FBgn0039016 | Length: | 2249 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | XP_031746242.1 | Gene: | ddx58 / 100495207 | XenbaseID: | XB-GENE-980097 | Length: | 967 | Species: | Xenopus tropicalis |
| Alignment Length: | 653 | Identity: | 107/653 - (16%) |
|---|---|---|---|
| Similarity: | 213/653 - (32%) | Gaps: | 230/653 - (35%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 18 RDFQVELLATAYE-RNTIICLGHRSSKEFIALKLLQELSRRARRHGRVSVYLSC----EVGTSTE 77
Fly 78 PCSIYTMLTHLTDLRVWQEQPDM---------------------QIPFDHCWTDYHVSILRPEGF 121
Fly 122 LYLLETREL-LLSSVELIVLEDCHDSAVYQRIRPLFENHI---MPAPPADRPRILGL-----AGP 177
Fly 178 LHSAGCELQQLSAMLATLEQSVLCQIETASDIV--TVLRYCSRPHEYIVQCAPFEMDELSLVLAD 240
Fly 241 VLNTHKSFLLDHRYDPYEI-------YGTDQFMDELKDIP--------DPKVDPLNVINSLLVVL 290
Fly 291 HEMGPWCTQRAAHHFYQCNEKLKV----KTPHERHYLLYCLVSTALIQLYSLCEHAFHR-HLGSG 350
Fly 351 SDSRQTIERYSSPKVRRLLQTLRCFKPEEVHTQADGLRRMRHQVDQADFNRLSHTLESKCRMVDQ 415
Fly 416 M--DQPPT------ETRALVATLEQILHTTEDRQTNRSAARVTPTPTPAHAKPKPSSGANTAQPR 472
Fly 473 TRRRVYTRRHHRDHNDGSDTLCALIYCNQNHTARVLFELLAEISRRDPDLKFLRCQYTTDRVADP 537
Fly 538 TTEPKEAELEHRRQEEVLKRFRMHDCNVLIGTSVLEEGIDVPKCNLVVRWDPPTTYRSYVQCKGR 602
Fly 603 ARA 605 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Dcr-1 | NP_524453.1 | DEAD-like_helicase_N | 15..208 | CDD:421690 | 39/224 (17%) |
| Dicer_PBD | 240..344 | CDD:277191 | 15/122 (12%) | ||
| DEAD-like_helicase_C | 490..614 | CDD:365791 | 26/116 (22%) | ||
| Dicer_dimer | 825..916 | CDD:397444 | |||
| PAZ_dicer_like | 1091..1212 | CDD:239209 | |||
| RIBOc | 1724..1930 | CDD:238333 | |||
| RIBOc | 2008..2172 | CDD:238333 | |||
| DSRM_DICER | 2177..2240 | CDD:380680 | |||
| ddx58 | XP_031746242.1 | DD | 4..88 | CDD:417479 | |
| CARD_2 | 100..190 | CDD:407008 | |||
| MPH1 | 276..838 | CDD:224036 | 107/653 (16%) | ||
| DEXHc_RIG-I_DDX58 | 277..478 | CDD:350831 | 39/219 (18%) | ||
| RLR_C_like | 840..951 | CDD:416942 | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 0 | 0.000 | Not matched by this tool. | |||
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D1337630at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R301 |
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 2.040 | |||||