DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45049 and Perp

DIOPT Version :10

Sequence 1:NP_001287471.1 Gene:CG45049 / 42691 FlyBaseID:FBgn0266409 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_071315.1 Gene:Perp / 64058 MGIID:1929938 Length:193 Species:Mus musculus


Alignment Length:180 Identity:45/180 - (25%)
Similarity:71/180 - (39%) Gaps:36/180 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 PLKVIAFICGVIVVALMIMALASTDWLMASDWRQ--GLFVHCIE--------DDSVPPLPFNIQD 139
            ||.:::      .:|..|:|||...||.:|:..|  .|:..|.:        ||           
Mouse    16 PLLLLS------AIAFDIIALAGRGWLQSSNHIQTSSLWWRCFDEGGGSGSYDD----------- 63

  Fly   140 PPGCYWTRDVGYIKATAALCIITLITDVIATVLTGLGLRTQNHNLKYKFYR-IAVLVMLVSLLAV 203
              ||....:..:.:|.||......|...|..:|:...|....   ...|.| |..|:.|.::..:
Mouse    64 --GCQSLMEYAWGRAAAATLFCGFIILCICFILSFFALCGPQ---MLVFLRVIGGLLALAAIFQI 123

  Fly   204 LSALIVYPVCFAGELTMANRRV--WEFGWAYGVGWGAAIFLFGAVVLLLC 251
            :| |::|||.:.....:.:...  :.:.||||.||.|.|.|.|......|
Mouse   124 IS-LVIYPVKYTQTFRLHDNPAVNYIYNWAYGFGWAATIILIGCSFFFCC 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45049NP_001287471.1 PMP22_Claudin <150..249 CDD:473919 27/101 (27%)
PerpNP_071315.1 PMP22_Claudin 17..164 CDD:473919 41/169 (24%)

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