DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45049 and tmem47

DIOPT Version :10

Sequence 1:NP_001287471.1 Gene:CG45049 / 42691 FlyBaseID:FBgn0266409 Length:273 Species:Drosophila melanogaster
Sequence 2:NP_988899.1 Gene:tmem47 / 394494 XenbaseID:XB-GENE-951338 Length:179 Species:Xenopus tropicalis


Alignment Length:190 Identity:47/190 - (24%)
Similarity:91/190 - (47%) Gaps:34/190 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 TITRPLKVIAFICGVIVVALMIMALASTDWLMA-SDWRQGLFVHCIEDDSVPPLPFNIQDPPGCY 144
            ::..|||::..:|..:.:.|.|.|:.|..|:.| :.:...|:..|.:.:::              
 Frog    14 SVLTPLKLVGLVCIFLALCLDIGAVLSPAWVTADNQYYLSLWESCKKAENL-------------- 64

  Fly   145 W----TRDVGYIKATAALCI----ITLITDVIATVLTGLGLRTQNHNLKYKFYRIAVLVMLVSLL 201
            |    |.:..:..||.||.:    |.||..::..:...:|.|.       :|||...:::..:::
 Frog    65 WICDSTLESDWQIATLALLLGGAAIILIAFLVGLISICVGSRR-------RFYRPVAVMLFAAVV 122

  Fly   202 AVLSALIVYPVCFAGELTMANRRVW-EFGWAYGVGWGAAIFLFGAVVLLLCDKESEEIYY 260
            ..:..|::||:.|...:|:   ::: ||.|.||:.|||.||.||..:|...:.::.|.||
 Frog   123 LQVCGLVLYPIKFIETVTL---KIYHEFNWGYGLAWGATIFSFGGAILYCLNPKNYEDYY 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45049NP_001287471.1 PMP22_Claudin <150..249 CDD:473919 29/103 (28%)
tmem47NP_988899.1 PMP22_Claudin 21..168 CDD:473919 40/170 (24%)

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