DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG45049 and emp1

DIOPT Version :9

Sequence 1:NP_001287471.1 Gene:CG45049 / 42691 FlyBaseID:FBgn0266409 Length:273 Species:Drosophila melanogaster
Sequence 2:XP_005160088.1 Gene:emp1 / 100318165 ZFINID:ZDB-GENE-070822-2 Length:184 Species:Danio rerio


Alignment Length:183 Identity:45/183 - (24%)
Similarity:84/183 - (45%) Gaps:31/183 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    83 TRP---LKVIAFICGVIVVALMIMALASTD---W----LMASDWRQGLFVHCIEDDSVPPLPFNI 137
            :||   ||.:|.||.:.:..:..:..|:.|   |    |....|.|.:..:   :|:|    :..
Zfish    18 SRPLNMLKALAGICLLHLTTIFFLFWATIDDAWWFTRTLYTDLWGQWVMEN---NDNV----WVY 75

  Fly   138 QDPPGCYWTRDVGYIKATAALCIITLITDVIATVLTGLGLRTQNHNLKYKFYRIAVLVMLVSLLA 202
            .|.|..| .:|  |::|.....:::.:..|.:.::..:.|.|..   |.|.:.::.:|.|:|...
Zfish    76 MDIPTSY-RKD--YLQAVQGFAVLSCLFAVFSLIVFIIQLFTLG---KGKRFILSGVVQLISCFC 134

  Fly   203 VLSALIVYPVCF-AGELTMANRRVWEFGWAYGVGW-GAAIFLFGAVVLLLCDK 253
            ::.||.||...| .||     :..| :||:|.:.| |..:.||..::.::..|
Zfish   135 IMVALSVYTDHFHRGE-----KDGW-YGWSYIMAWFGWLLTLFTGIMYIILRK 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG45049NP_001287471.1 PMP22_Claudin <150..249 CDD:304458 25/100 (25%)
emp1XP_005160088.1 PMP22_Claudin 23..176 CDD:328820 42/171 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
00.000

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