DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4813 and RNF220

DIOPT Version :9

Sequence 1:NP_651088.1 Gene:CG4813 / 42690 FlyBaseID:FBgn0039013 Length:398 Species:Drosophila melanogaster
Sequence 2:NP_001363415.1 Gene:RNF220 / 55182 HGNCID:25552 Length:592 Species:Homo sapiens


Alignment Length:408 Identity:146/408 - (35%)
Similarity:201/408 - (49%) Gaps:72/408 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 ICPTCDVKIKRSQVADHCQVEMERLHN-PIS-------AVTPPTPTS------------GATASE 69
            |||.|.|.::.|::.:|.:.|:|:|.. |.|       |:.|.||.|            ..|||.
Human   223 ICPICQVLLRPSELQEHMEQELEQLAQLPSSKNSLLKDAMAPGTPKSLLLSASIKREGESPTASP 287

  Fly    70 ESGSVSG--GRQPWSVFQRVQRNRQARQRQRTRKRPASPAPPATVNPTVAAAPPPAAATPSVAAA 132
            .|.:...  ....:..|.||:.|||.|...|..|..........|                    
Human   288 HSSATDDLHHSDRYQTFLRVRANRQTRLNARIGKMKRRKQDEGQV-------------------- 332

  Fly   133 ESSQPTCPVCNHNF--PQSNIQEHVNHCLRQSRRNGQANGERHSSE-DSEDSEEYEEYEWAGQKR 194
                  ||:||...  .:..:..||.|||  |:|.|....|..:.: :.|::..:|||||.||||
Human   333 ------CPLCNRPLAGSEQEMSRHVEHCL--SKREGSCMAEDDAVDIEHENNNRFEEYEWCGQKR 389

  Fly   195 IRVSTLVQGGYSALGLGQRIKYNGSQQAQDDEDEDLNVDEDDTHIYGPTQYGEGDVIPLVNEDTE 259
            ||.:||::||:...|.   |..:|.:  ..|.|.||:||.|||..||..||.|.||||...|:. 
Human   390 IRATTLLEGGFRGSGF---IMCSGKE--NPDSDADLDVDGDDTLEYGKPQYTEADVIPCTGEEP- 448

  Fly   260 GNVSEADVTSYVRRLISSSDGPK----PNHSSEATEQEPASTSNVEAPPASEEPSTSRST---RS 317
               .||.....:|..:.:...|.    |..|..|:::.| ||||.|:........|.:::   :.
Human   449 ---GEAKEREALRGAVLNGGPPSTRITPEFSKWASDEMP-STSNGESSKQEAMQKTCKNSDIEKI 509

  Fly   318 TSQNQQQIIESLKAKLRLYEKQ-AQG-KYKCLICIDDYKNPAISVSCWHVHCEQCWLQTLGARKL 380
            |..:.....|:|||::|..|:| ::| :||||||:|.|..|..|:.|||||||:|||:||||:||
Human   510 TEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHCEECWLRTLGAKKL 574

  Fly   381 CPQCNSITTPKDLRRIYL 398
            |||||:||.|.|||||||
Human   575 CPQCNTITAPGDLRRIYL 592

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4813NP_651088.1 RNF220 22..281 CDD:292548 85/280 (30%)
zf-C3HC4_2 346..384 CDD:290634 26/37 (70%)
RNF220NP_001363415.1 RNF220 219..468 CDD:374229 85/281 (30%)
RING-HC_RNF220 539..579 CDD:319477 28/39 (72%)
RING-HC finger (C3HC4-type) 540..578 CDD:319477 26/37 (70%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159885
Domainoid 1 1.000 80 1.000 Domainoid score I8637
eggNOG 1 0.900 - - E1_28IQH
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H10036
Inparanoid 1 1.050 196 1.000 Inparanoid score I3825
Isobase 1 0.950 - 0 Normalized mean entropy S6937
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1583675at2759
OrthoFinder 1 1.000 - - FOG0007312
OrthoInspector 1 1.000 - - oto90210
orthoMCL 1 0.900 - - OOG6_106737
Panther 1 1.100 - - LDO PTHR13459
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5368
SonicParanoid 1 1.000 - - X5422
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.740

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