DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment wge and Tnrc18

DIOPT Version :9

Sequence 1:NP_732790.3 Gene:wge / 42687 FlyBaseID:FBgn0051151 Length:1669 Species:Drosophila melanogaster
Sequence 2:XP_006504750.1 Gene:Tnrc18 / 231861 MGIID:3648294 Length:2951 Species:Mus musculus


Alignment Length:2602 Identity:521/2602 - (20%)
Similarity:756/2602 - (29%) Gaps:1125/2602 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ASSSAADVLSATTATATFLVPTTA-----------------AVSHPGAHTAHLQLDQFGGFSAAT 55
            ||.:..:...||.:...:|.|..|                 |...||..:|...|.::.|..|..
Mouse   515 ASRAEEEAAVATASKKAYLDPGGAMPRASATCGRPGADLHSAAHGPGEASAMQSLIKYSGSFARE 579

  Fly    56 ATPLQHHHHQQTNSSYTFVQIKREPCQVSEISSNNCHQQQQQHHQHHQHQVQHQGLSSASMTASS 120
            |..::.....:.:.......:|.||...|            ......|.::.|.|:.:|......
Mouse   580 AVAVRPGGCGKKSPFGGLGTMKPEPTPTS------------AGPPRAQARLTHPGVPTAGGGRQL 632

  Fly   121 KTMSSSTLTTLVKIEAPSPKVSELEKSTGNS------------VPIGIAVARKRPQEA-----LV 168
            |.               .|:..|..|:.|..            .|:|||||..|.:::     |.
Mouse   633 KR---------------DPERPESAKAFGREGSGAQGEAEVRHPPVGIAVAVARQKDSGSSSRLG 682

  Fly   169 PAI-NTPATLPL-------------QPPLNKDLNCFGIR--------------VADLG---ATSC 202
            |.: :...||.|             ....:::....|.|              :|||.   .|||
Mouse   683 PGLGDQERTLSLNNVKGHGRTDDECDRARHREDRLLGTRLDRDQEKLLRESKELADLARLHPTSC 747

  Fly   203 G------NLYFTGNGDLMTTGTATAEELALSAAG--VNRAPST-FW--QYPNAL-PIESVISMSP 255
            .      ||..||...|..:|..:|:..|..|..  :.|:.|| .|  .:|..| |......|:|
Mouse   748 APNGLNPNLMVTGGPTLAGSGRWSADPAAHLATNPWLPRSGSTSMWLAGHPYGLGPPSLHQGMAP 812

  Fly   256 A-TVGL--------QYSREASRGQVVLLPAGPTALGISNFPLLTPTDPFQQAAAAAAFVWPSAYI 311
            | ..||        |:.|:...||:|::|:.    .:.:|..|       ...||...:||:.| 
Mouse   813 AFPPGLGGSLPSAYQFVRDPQSGQLVVIPSD----HLPHFAEL-------MERAAVPPLWPALY- 865

  Fly   312 PQAPAPGGHSAAAAAAAASLQPTPNLSSLPNFIFPSMGGHQALSTTPSYASTLQLYLAAAATATG 376
                 |.|.|....|....|....:.......::......|||....| |..:|..|.|....| 
Mouse   866 -----PPGRSPLHHAQQLQLFSQQHFLRQQELLYLQQQAAQALELQRS-AQLVQERLKAQEHRT- 923

  Fly   377 SSTMCQHSNQQTSTTTTNSTINLSLAAGSGVTQSGNAASSLSSSSSLSASSSRFLSLATGQTGIP 441
              .|.:..::::..||..:.::   |||.|:....:|                  .||.|..|..
Mouse   924 --EMEEKISKRSLETTGKAGLS---AAGPGLLPRKSA------------------GLANGPAGSH 965

  Fly   442 SLLSLPPP-------TGLKEE---------------YPM---------PLALPPLVPLEAARDKE 475
            .....|||       |.||.:               ||.         |.|.||  |......||
Mouse   966 GKAVSPPPSPRASPVTSLKAKVIQKVEDVSKPPAYTYPATPSSHPSSPPPASPP--PTPGLTRKE 1028

  Fly   476 QA---------LNLMRLPTPPTSA---TMEPSSLGHATPHHLFQSGAMATPTPALLNLSMHGNGG 528
            :|         |.|.:....|..|   .:.|.....|.|.|      ...|.|.||..:...:..
Mouse  1029 EAPENVVEKKDLELEKETPSPFQALFTDIPPRYPFQALPPH------YGRPYPFLLQPAAASDAD 1087

  Fly   529 ELPAATPLPAVSDEAALNYKLHAPLTPQTPPRLADIPVSGSTQLLPQMQDVNIQTDTPVCSEDES 593
            .|....||||                 ..|.|||         |.|:        |.|:|.....
Mouse  1088 GLAPDVPLPA-----------------DGPERLA---------LSPE--------DKPICLSPSK 1118

  Fly   594 FPGSAKPQD-PAAEAFPP-------------PTHVQPLE------------LTKPSEASHTQPTE 632
            .|  ..|:| |..|....             ||.:.|||            ...|:......|.|
Mouse  1119 IP--EPPRDSPEEEQLADREVKAEVEDIEEGPTELPPLESPLALPVPETMVAVSPAGGCGGSPLE 1181

  Fly   633 CHTQT-------EPSDIPSASQ-EESAEQTPPEPIETMTQATQADQTSPEDLTGLELLSNISTNS 689
            ....:       |||::...:| .|...:.|.:....||......|.:||               
Mouse  1182 AQALSTAGPGCREPSEVSDFAQVAEPQIELPSKTEHRMTALELGTQLTPE--------------- 1231

  Fly   690 KPLVRVKQEPVEHIEQPAPQPQPVNIMPSEPTLPMPPMLEMEPTSE------------------- 735
             |||..|:|||| :....|..:|......|.:||.|.:.|.:|:.|                   
Mouse  1232 -PLVETKEEPVE-VPLDVPMEEPTTEAGPEDSLPQPSLTEPQPSLELSDCDLPVPEGQCLNLEAQ 1294

  Fly   736 ------------------------REPLGGLKLLCALAE-------------------------- 750
                                    .:||.|:..|.|.||                          
Mouse  1295 EAVPAPASTCYLEETHSESLLPGLDDPLAGMNALAAAAELPQARPLPSLGPGVPAGEKLDTAPSL 1359

  Fly   751 ----------------------QRIQE--------------------------EVVQG------- 760
                                  :|.||                          ||::.       
Mouse  1360 VLEHSFLQGITLLSEIAELELDRRGQEAADPEPNLVVRPSLESLLAASSHMLKEVLESPFSDPLK 1424

  Fly   761 ---------------------SSLFATPSS----------------------------------- 769
                                 ..:||..||                                   
Mouse  1425 NLRLPRELNSNKKYSWMQKKEERMFAMKSSLEDMDALELDFRMRLAEVQRRYKEKQRELVKLQRR 1489

  Fly   770 ----------------RTP-TPTSLALGTTAATPPIFEAKSCYAFGQ-SQGSVFPS--------- 807
                            |.| .|.......:|.:||....||..:.|: |..|:..|         
Mouse  1490 RDSGDRHEDAHRSLARRGPGRPRKRTHTLSALSPPCKRGKSHSSSGKLSSKSLLTSDDYDLGAGI 1554

  Fly   808 -------------------------------STSSFQMPL------------------------- 816
                                           |:|.|...|                         
Mouse  1555 RKRHKGPEEEQEALMGMGKARSRNQSWDDHDSSSDFMSQLKIKKKKMASDQEQLASKLDRALSLT 1619

  Fly   817 ------------SSPG---------------FPSMQGIELPTTSAGIVAELTPVKRKKHKH-SKS 853
                        ..||               :.|:.|.:....:.|:...|.|.:..|||. ||:
Mouse  1620 KQDKLKSPFKFSDGPGGKPKTGGGCGRFLTQYDSLLGKDRKALAKGLGLSLKPSREGKHKRASKA 1684

  Fly   854 SGSDSRKSARCSKKSKKKRHHSS-SRQQFSAPAEEDLDLQDDQLQSELRNALHAVDPSYAQRFGQ 917
            ...:....||...||......|. |.|.::..::||.|.        |:|...|..||.::....
Mouse  1685 RKMEGGFQARGQPKSVHSPFASEVSSQSYNTDSDEDEDF--------LKNEWSAQGPSSSKLTSS 1741

  Fly   918 EVFSIM-DNSMRMRLAKITRQYRKKKRKL-DEISKHKKKKKC----------------------- 957
            .:..:: .||......|:|::.....|.| .::...:|:..|                       
Mouse  1742 LLCGMVPKNSKPATGPKLTKRGLAGPRTLKPKVVTSRKQSFCLLLREAEARSSFSDSSEEDSFDQ 1806

  Fly   958 ----SKQQLELQQQQ--------------ASQQAVQPS--------------SALQQPQM--TLS 988
                .:::.||::::              |.:||:.||              |||..|.:  .||
Mouse  1807 DDSSEEEEEELEEEEEDEEEEGIGSYRLGAGEQALSPSLEESGLGLLARFAASALPSPVVGPPLS 1871

  Fly   989 -----------------SVLGTSSPLRD----YKFPKFSSSN-LQASSFLRFPDKTHSFPPPPSL 1031
                             |:|||.....|    .|.||.|::. |:....:..|.::.:.|.|.|.
Mouse  1872 VVQLEAEQKARKKEERQSLLGTEFEYTDSESEVKVPKQSAAGLLRTKKGVGEPGQSLAAPGPGSR 1936

  Fly  1032 QQ--SQPEPNPLPS-----------------SSSPSTSS------------FVRLEPSALDAAVA 1065
            ..  |.|:...|.|                 .:.|..|.            |:....:|:.|...
Mouse  1937 ASGPSSPDKAKLVSEKGRKARKIRGPKEPGFEAGPEASDDDLWTRRRSERIFLHDASAAVQATSN 2001

  Fly  1066 IAPTT--SSTSTSGSPSTKQVASARKQRK------------------------------------ 1092
            .||.|  |.....|:||.::.....|.||                                    
Mouse  2002 TAPATKPSRCGRGGAPSPRKDTGRAKDRKDPRKKKRGKEAGSAATLPPPRVSTLPDSRAPHPGAL 2066

  Fly  1093 --MKASTVGAAGEQTAATEAKRRFSAIDRELQLTS----------------EHLYR--------- 1130
              .|.|...|.|:: |..|.:.:..|:.:.::..:                |||.|         
Mouse  2067 ATAKRSKAKARGKE-AKKENRGKGGAVSKLMECMAAEEDFEANQDSSFSEDEHLPRGGATERPLT 2130

  Fly  1131 --------------DETRVLTDMGG-LFYAGVMKPLRPPDVYSITLDGERGNKSHVMSREDILKD 1180
                          |..|||..:.. |.|||.::.:..||:|.:.::|||||:.|:...|.:|::
Mouse  2131 PAPRSCIIDKEELKDGLRVLIPLDDKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIYCLEQLLQE 2195

  Fly  1181 TILEVAPKSVESVPVGTRLCAYWSQQYRCLYPGRAI----DSEQVVDGTASSATNAATTAPDFVS 1241
            .|::|.|.|...:|.|||:.|||||||||||||..:    |.|.  ||             |.::
Mouse  2196 AIIDVRPASTRFLPQGTRIAAYWSQQYRCLYPGTVVRGLLDLED--DG-------------DLIT 2245

  Fly  1242 VEFDDGDSGRIRLQNIRMLLSDYPIAEYNDNPLYSV--------------GKQKRSALRGGESGP 1292
            |||||||:|||.|.:||:|..||.|.....:|...|              |:.|..|..|.:...
Mouse  2246 VEFDDGDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRRSRKTSKDTGEVKEGAATGPQEAT 2310

  Fly  1293 GGVTQDHLTVPGCEDSHSHHSL---GMSSDNTTSLAATMELFTQRSEKKRLKKSLKKMSKAQNGV 1354
            ||..:.....|..:.......:   |.:::...|....:|..:..:.||...:.:.|.::|....
Mouse  2311 GGKARGRGRKPSTKAKADRAVVLEEGAATNEVPSAPLALEPISTPNSKKSTPEPVDKRARAPKAR 2375

  Fly  1355 S--------------------------PAT-----------ATNGGADAAALGDGVSAEDAAR-- 1380
            |                          |||           ||......|...:|..|:...|  
Mouse  2376 SISAQPSPVPPTFSSCPAPEPFGELPTPATAPLVTMPVTMPATRPKPKKARAAEGSGAKGPRRPG 2440

  Fly  1381 ---------KHH-----KHKKRKK----------------------------------------- 1390
                     .|.     |.||.|:                                         
Mouse  2441 EDDELLVKLDHEGVMSPKSKKAKEALLLREDPGPGGWPESTGLLSLGSYSPAVGSSEPKATWPKG 2505

  Fly  1391 ------------------------HKKHHRKNGSEEQEQQVVQQDYSAAGQEATEAPSTEMS--- 1428
                                    .|....::|:||.|........|::...::.:.|:..|   
Mouse  2506 LDGDLTQEPGPGLPLEDPGNSKNPDKAQAEQDGAEESETTSSSSSSSSSSSSSSSSSSSSSSSSS 2570

  Fly  1429 -------------------------SATSSRVKVEVKVKTEQLEMEEEESASNLMSEISDEAKGD 1468
                                     ||.|||........:.........|:|:..|..|..:...
Mouse  2571 GSETEGEEDAEKNREDGRGAGGRTCSAASSRASSPASSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2635

  Fly  1469 DLVEHNNSKGSS----------------------------------------------------- 1480
            .....::|..||                                                     
Mouse  2636 SSSSSSSSSSSSSSSTTDEDSSCSSDEEAAPAPAAGPSTQPALPTKVSKPPSKARSSAHSPGKKA 2700

  Fly  1481 -----------------------------------------------------------KIAAFL 1486
                                                                       ||||||
Mouse  2701 PTTTQPPPQPPPQPQQTLQPKTQAGAGAKSRPKKREGVHLPTTKELAKRQRLPSVENRPKIAAFL 2765

  Fly  1487 PERQLWGWYGTAYRKAGVKGRARKQFYKTIKRGKETITVGDSAVFLSTGRPDRPYIGRIESMWET 1551
            |.||||.|:|...::.|:||:|||.|||.|.||||.|.:||.|||||.|||:.||||||:||||:
Mouse  2766 PARQLWKWFGKPTQRRGMKGKARKLFYKAIVRGKEMIRIGDCAVFLSAGRPNLPYIGRIQSMWES 2830

  Fly  1552 TTGNKVVRVAWFYHPEETTGCPKLKFPG---------------------------------ALFE 1583
            ...|.||||.||||||||:       ||                                 ||::
Mouse  2831 WGNNMVVRVKWFYHPEETS-------PGKQFHEGQHWDQKSGHSLPAALRASSQRKDFMERALYQ 2888

  Fly  1584 SPHEDENDVQTISHRCEVLQFGSYFEKFGADSKQYQSIYDNNDTYYLAGHYNPRLQVLKLQDDIP 1648
            |.|.|||||||:||:|.|:....|.:..  .:|:||   |:...|||||.|.|...::...|.:|
Mouse  2889 SSHVDENDVQTVSHKCLVVGLEQYEQML--KTKKYQ---DSEGLYYLAGTYEPTTGMIFSTDGVP 2948

  Fly  1649 TL 1650
            .|
Mouse  2949 VL 2950

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
wgeNP_732790.3 BAH_BAHCC1 1520..1642 CDD:240065 65/154 (42%)
Tnrc18XP_006504750.1 PHA03247 <1049..1358 CDD:223021 72/367 (20%)
Tudor_3 2212..2264 CDD:384925 33/66 (50%)
PRK12323 <2265..2479 CDD:237057 34/213 (16%)
BAH_BAHCC1 2799..2943 CDD:240065 65/155 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167839548
Domainoid 1 1.000 176 1.000 Domainoid score I3613
eggNOG 1 0.900 - - E1_KOG1886
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 226 1.000 Inparanoid score I3480
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm44173
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12505
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4824
SonicParanoid 1 1.000 - - X2140
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.880

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