DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6d4 and cyp26b1

DIOPT Version :10

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001072655.1 Gene:cyp26b1 / 780112 XenbaseID:XB-GENE-991500 Length:511 Species:Xenopus tropicalis


Alignment Length:533 Identity:111/533 - (20%)
Similarity:213/533 - (39%) Gaps:123/533 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLILLAVTLLTLAWFYLKRHYEYWERR---------GFPFEKHS-GIPFGCLDSVWRQEKSMGLA 57
            :|..||..|:::| ..|....:.|:.|         ..|..|.| |.|.......|..:.|    
 Frog    11 ALATLAACLVSVA-LLLAVSQQLWQLRWAATRDKSCKLPIPKGSMGFPLVGETFHWILQGS---- 70

  Fly    58 IYDVYVKSKER---VLGIYLLFRPAVLIRDADLARRVLAQDFASFHDRGVYVDEERDPLSANIFS 119
              |.....:|:   |...:||.||.:.:..|:..|::|   ....|                   
 Frog    71 --DFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKIL---MGEHH------------------- 111

  Fly   120 LRGQSW-RSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAH--LQKELPEEGFKEVDIKKVMQNYA 181
            |....| ||.|.:|.|...:..:..:......:..|:.:|  |:..||:       |:.|:|: .
 Frog   112 LVSTEWPRSTRMLLGPNSLANSIGDIHRHKRKVFSKIFSHEALESYLPK-------IQLVIQD-T 168

  Fly   182 IDIIASTIFGLDVNSFENPDN--------------KFRKLVSLARANNRFNAMFGMM------IF 226
            :.:.:|           ||::              ..|.|:....::...:.:|.:.      :|
 Frog   169 LRVWSS-----------NPESINVYCEAQKLTFRMAIRVLLGFRLSDEELSQLFQVFQQFVENVF 222

  Fly   227 LVPSIAQFLFRIGFKNPVGLAMLQIVKETVE--YREK----HGIVRKDLLQLLIQLRNTGKIDEN 285
            .:|....|   .|::.  |:...:::.:::|  .:||    .|....|.|.:||:   :||   .
 Frog   223 SLPVDVPF---SGYRR--GIRAREMLLKSLEKAIQEKLQNTQGKDYADALDILIE---SGK---E 276

  Fly   286 DEKSFSIQKTPDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEV-D 349
            ..|..::|:..||.::.|             .|...||.|.:...|.:|.::|.:|::|::|: .
 Frog   277 HGKELTMQELKDGTLELI-------------FAAYATTASASTSLIMQLLKHPSVLEKLREELRG 328

  Fly   350 ETLAKN----DGKITYDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPV 410
            .::..|    :|.:..::::.:.:||..::|.:|.:.  |:.....|...|.......||||..|
 Frog   329 NSILHNGCVCEGALRVETISSLHYLDCVIKEILRLFS--PVSGGYRTVLQTFELDGFQIPKGWSV 391

  Fly   411 VISLYGIHHDAEYFPDPETYDPERFSEESRNYNPTAF--MPFGEGPRICIAQRMGRINSKLAIIK 473
            :.|:...|..|..|.|.:.:||:||.::........|  :|||.|.|.|:.:.:.::..|:..|:
 Frog   392 LYSIRDTHDTAPVFKDVDVFDPDRFGQDRTEDKDGRFHYLPFGGGVRNCLGKHLAKLFLKVLAIE 456

  Fly   474 ILQNFNVEVMSRS 486
            :......|:.:|:
 Frog   457 LASMSRFELATRT 469

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 CYP6-like 66..504 CDD:410679 95/460 (21%)
cyp26b1NP_001072655.1 CYP26B1 60..489 CDD:410730 98/483 (20%)

Return to query results.
Submit another query.