DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and cyp26c1

DIOPT Version :10

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001025122.2 Gene:cyp26c1 / 554036 ZFINID:ZDB-GENE-050714-2 Length:554 Species:Danio rerio


Alignment Length:575 Identity:116/575 - (20%)
Similarity:220/575 - (38%) Gaps:176/575 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 SLILLAVTLLTLAWFYLKRHYEYWE-RRGFPFEKHSGIPFGCLDSVWRQEKSMGLAIY------- 59
            :::||||:.|            .|| |.....::...:|.        .:.|||..:.       
Zfish    22 TVLLLAVSRL------------LWEFRWSITRDRTCKLPL--------PQGSMGWPLVGETFHWL 66

  Fly    60 ----DVYVKSKE---RVLGIYLLFRPAVLIRDADLARRVLAQDFASFHDRGVYVDEERDPLSAN- 116
                ..::..:|   :|...:||.:|.:.:..|:..|::|..:......:  :....|..|..| 
Zfish    67 FQGSSFHISRREKHGKVFKTHLLGKPLIRVTGAENIRKILLGEHTVVCTQ--WPQSTRIILGPNT 129

  Fly   117 IFSLRGQSWRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYA 181
            :.:..|...:..|.:|:..|:.|.|::..:..:|:   :.:.:.|...|.|  .|::....::..
Zfish   130 LVNSVGDLHKRKRKVLAKVFSRGALEAYLTRLQDV---VKSEIAKWCTETG--SVEVYTAAKSLT 189

  Fly   182 IDIIASTIFGLDVNSFENPDNKFRKLVSLARA-----NNRFNAMFGMMIFLVPSIAQFLFRIGFK 241
            ..|....:.||.:..        :::..|::.     ||                   ||.:...
Zfish   190 FRIAVRVLLGLHLEE--------QQITYLSKTFEQLMNN-------------------LFSLPID 227

  Fly   242 NPV-GL------------AMLQIVKETVEYREKHGIVRKDLLQLLIQLRNTGKIDENDEKSFSIQ 293
            .|| ||            ||.:|::|.::.::     ..|.......:.::.:  |||.: .::|
Zfish   228 TPVSGLRKGIRAREILHSAMEKIIEEKLKKQQ-----ASDYCDAFDYMLSSAR--ENDYE-LTMQ 284

  Fly   294 KTPDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDG- 357
            :..:           ||...||  |...||.|.:...|.:|.::|::.:|.:.|::......|| 
Zfish   285 ELKE-----------TAVELIF--AAHSTTASASTSLIMQLLRHPDVSERARAELESEGLITDGH 336

  Fly   358 -------------------------------KITY---------------------DSLNKMEFL 370
                                           |.||                     :.|:::.:|
Zfish   337 GHCRSRCNGNAISEEGEAAEKSTSDRRSAINKATYFEAGDKEEGRRSRTHVPYLSLEKLSQLSYL 401

  Fly   371 DLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYFPDPETYDPERF 435
            |..|:|.:|..|  |:.....|...|.....:.||||..|:.|:...|..||.:.:||.:||:||
Zfish   402 DCVVKEVLRFLP--PVSGGYRTVLQTFELNGYQIPKGWSVMYSIRDTHETAEAYQNPELFDPDRF 464

  Fly   436 ---SEESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSE 487
               .|||:: ...:::|||.|.|.||    ||   :||:| :|:...||:::.::
Zfish   465 CVGREESKS-ERFSYVPFGGGVRRCI----GR---ELALI-VLKTLAVELLATAD 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 CYP6-like 66..504 CDD:410679 104/500 (21%)
cyp26c1NP_001025122.2 cytochrome_P450 59..537 CDD:477761 104/518 (20%)

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