DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and cyp3a4.2

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_001015786.1 Gene:cyp3a4.2 / 548503 XenbaseID:XB-GENE-971750 Length:504 Species:Xenopus tropicalis


Alignment Length:537 Identity:168/537 - (31%)
Similarity:269/537 - (50%) Gaps:81/537 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIPF-GCLDSVWRQEKSMGLAIYDV-YVKSKE 67
            |||| .||.|...|....|.|:::.|.|  ..:.:|| |..     .|...|:..:|. ..|...
 Frog    13 ILLA-ALLVLILLYGIWPYGYFKKMGIP--GPTPLPFIGTF-----LEFRKGMVQFDTECFKKYG 69

  Fly    68 RVLGIYLLFRPAVLIRDADLARRVLAQD-FASFHDR---GVYVDEERDPLSANIFSLRGQSWRSM 128
            ::.|.|...:|.:.|.|..:.:.:|.:: :.:|.:|   |:     ..|..:.|.....:.|:.:
 Frog    70 KMWGTYDGRQPVLAIMDPAIIKTILVKECYTNFTNRRNFGL-----NGPFESAITIAEDEQWKRI 129

  Fly   129 RHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVD----IKKVMQNYAIDIIASTI 189
            |::|||.|||||||.||...:|..|.:|.::|      |:.|.|    .|.|:..|::|:|.||.
 Frog   130 RNVLSPTFTSGKLKEMFQIMKDYSDILVKNIQ------GYVEKDEPCATKDVIGAYSMDVITSTS 188

  Fly   190 FGLDVNSFENPDNKF----RKLVSLARANNRFNAMFGMMIFLVPSIAQFLFRIGFKNPV--GLAM 248
            |.::::|...|.:.|    :||:.        ..:...::.||     .:|  .|..|:  ||.:
 Frog   189 FSVNIDSLNKPSDPFVIHMKKLLK--------TGLLSPLLILV-----VIF--PFLRPILEGLNL 238

  Fly   249 LQIVKETVE--------YREK-----HGIVRKDLLQLLIQLRNTGKIDENDEKSFSIQKTPDGHI 300
            ..:.|:..|        :|||     |. .|.|||||::..|.||..|.:::.            
 Frog   239 NFVPKDFTEFFMNAVTSFREKRKKGDHS-GRVDLLQLMMDSRTTGGNDLSNKH------------ 290

  Fly   301 KTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKITYDSLN 365
            |.::...|.||:.||.:||.|||.:..::..|.||.:|::.:||.:|:|..| .:....|||.|.
 Frog   291 KALTDAEIMAQSVIFIVAGYETTSTALSYLFYNLATHPDVQQRLHEEIDSFL-PDKASPTYDILM 354

  Fly   366 KMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYFPDPETY 430
            :||:||:.:|||:|.:|....|.|...|:..:...:  ||||...:|..|.:..|.||:|:||.:
 Frog   355 QMEYLDMVIQETLRLFPPAGRLERVSKQNVEINGVS--IPKGIVTLIPAYVLQRDPEYWPEPEEF 417

  Fly   431 DPERFSEESR-NYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEIEFENSG 494
            .|||||:|:| .:.|..|:|||:|||.||..|...::.|:||:.:||||:|...:.:.|..|.|.
 Frog   418 RPERFSKENRATHTPFTFLPFGDGPRNCIGLRFALLSMKVAIVTLLQNFSVRPCAETLIPMEFST 482

  Fly   495 IALI-PKHGVRVRLSKR 510
            |..: ||..:.::...|
 Frog   483 IGFLQPKKPIVLKFLSR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 148/471 (31%)
cyp3a4.2NP_001015786.1 p450 39..496 CDD:365848 156/505 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 239 1.000 Domainoid score I2234
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 248 1.000 Inparanoid score I3174
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.060

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