DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and Cyp3a2

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_695224.3 Gene:Cyp3a2 / 266682 RGDID:708379 Length:504 Species:Rattus norvegicus


Alignment Length:539 Identity:182/539 - (33%)
Similarity:279/539 - (51%) Gaps:87/539 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIPFGCLDSVWRQEKSMGLAIYDVYVKSKERV 69
            :||||.|:.|......|| ..::::|.|..|  .:||  |.:|....|.:|....:.| |...::
  Rat    13 VLLAVILVLLYRLGTHRH-GIFKKQGIPGPK--PLPF--LGTVLNYYKGLGRFDMECY-KKYGKI 71

  Fly    70 LGIYLLFRPAVLIRDADLARRVLAQD-FASFHDR---------GVYVDEERDPLSANIFSLRGQS 124
            .|::....|...|.|.::.:.||.:: |:.|.:|         |..|...:|           :.
  Rat    72 WGLFDGQTPVFAIMDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAVSVAKD-----------EE 125

  Fly   125 WRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIASTI 189
            |:..|.:|||.||||:||.||...|..||.:|.:|::| .|.| |.|.:|||...|::|:|.||.
  Rat   126 WKRYRALLSPTFTSGRLKEMFPIIEQYGDILVKYLKQE-AETG-KPVTMKKVFGAYSMDVITSTS 188

  Fly   190 FGLDVNSFENPDNKF-RKLVSLARANNRFNAMFGMMI---FLVP-------------SIA---QF 234
            ||::|:|..||.:.| .|...|.|. :.|:.:|..::   ||.|             |||   :|
  Rat   189 FGVNVDSLNNPKDPFVEKTKKLLRF-DFFDPLFLSVVLFPFLTPIYEMLNICMFPKDSIAFFQKF 252

  Fly   235 LFRIGFKNPVGLAMLQIVKET-VEYREKHGIVRKDLLQLLIQLRNTGKIDENDEKSFSIQKTPDG 298
            :.||              ||| ::.:.||   |.|.|||::...|..|    ||.|.        
  Rat   253 VHRI--------------KETRLDSKHKH---RVDFLQLMLNAHNNSK----DEVSH-------- 288

  Fly   299 HIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKITYDS 363
              |.:|...|.||:.||..||.|||.||.:|.:|.||.:|::.|:||:|:|..| .:....|||.
  Rat   289 --KALSDVEIIAQSVIFIFAGYETTSSTLSFVLYFLATHPDIQKKLQEEIDGAL-PSKAPPTYDI 350

  Fly   364 LNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYFPDPE 428
            :.:||:||:.:.||:|.||....|.|.|.:|..:...  .||||:.|.|..|.:|||.:::|.||
  Rat   351 VMEMEYLDMVLNETLRLYPIGNRLERVCKKDIELDGL--FIPKGSVVTIPTYALHHDPQHWPKPE 413

  Fly   429 TYDPERFSEESR-NYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEIEFEN 492
            .:.|||||:|:: :.:|..::|||.|||.||..|...:|.|||:.|:||||:.:....::|..:.
  Rat   414 EFHPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQIPLKL 478

  Fly   493 SGIALI-PKHGVRVRLSKR 510
            |..|:: |:..:.:::..|
  Rat   479 SRQAILEPEKPIVLKVLPR 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 163/474 (34%)
Cyp3a2NP_695224.3 CYP3A 67..493 CDD:410743 162/473 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.970

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