DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and Cyp3a23-3a1

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_037237.2 Gene:Cyp3a23-3a1 / 25642 RGDID:628626 Length:502 Species:Rattus norvegicus


Alignment Length:530 Identity:176/530 - (33%)
Similarity:279/530 - (52%) Gaps:96/530 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 ILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIP-FGCLDSVWRQEKSMGLAIYDVYVKSK-E 67
            :||||.|:.|..|..:.| ..::::|.|..|  .:| ||.:.:.:     |||..:||....| .
  Rat    13 VLLAVVLVLLYGFGTRTH-GLFKKQGIPGPK--PLPFFGTVLNYY-----MGLWKFDVECHKKYG 69

  Fly    68 RVLGIYLLFRPAVLIRDADLARRVLAQD-FASFHDR---------GVYVDEERDPLSANIFSLRG 122
            ::.|::....|...|.|.::.:.||.:: |:.|.:|         |..:...:|           
  Rat    70 KIWGLFDGQMPLFAITDTEMIKNVLVKECFSVFTNRRDFGPVGIMGKAISVSKD----------- 123

  Fly   123 QSWRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIAS 187
            :.|:..|.:|||.||||:||.||...|..||.:|.:|::   |:| |.|.:|:|...|::|:|.|
  Rat   124 EEWKRYRALLSPTFTSGRLKEMFPVIEQYGDILVKYLRQ---EKG-KPVPVKEVFGAYSMDVITS 184

  Fly   188 TIFGLDVNSFENPDNKF----RKLVSLARANNRFNAMFGMMIFLVPSIAQFLFRIGFKNPVGLAM 248
            |.||::|:|..||.:.|    :||:.:    :.|:.:| :.:.|.|          |..|| ..|
  Rat   185 TSFGVNVDSLNNPKDPFVEKAKKLLRI----DFFDPLF-LSVVLFP----------FLTPV-YEM 233

  Fly   249 LQIV---KETVE------YR---------EKHGIVRKDLLQLLIQLRNTGKIDENDEKSFSIQKT 295
            |.|.   |:::|      ||         :||   |.|.|||::...|    |..|::|      
  Rat   234 LNICMFPKDSIEFFKKFVYRMKETRLDSVQKH---RVDFLQLMMNAHN----DSKDKES------ 285

  Fly   296 PDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKIT 360
               |.....:| ||||:.||..||.|.|.||.:|.::.||.:|:..|:||:|:|..| .|....|
  Rat   286 ---HTALSDME-ITAQSIIFIFAGYEPTSSTLSFVLHSLATHPDTQKKLQEEIDRAL-PNKAPPT 345

  Fly   361 YDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHV-IPKGTPVVISLYGIHHDAEYF 424
            ||::.:||:||:.:.||:|.||....|.|.|.:|..:   |.| :|||:.|:|..|.:|.|.:::
  Rat   346 YDTVMEMEYLDMVLNETLRLYPIGNRLERVCKKDVEI---NGVFMPKGSVVMIPSYALHRDPQHW 407

  Fly   425 PDPETYDPERFSEESR-NYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEI 488
            |:||.:.|||||:|:: :.:|..::|||.|||.||..|...:|.|||:.|:||||:.:....::|
  Rat   408 PEPEEFRPERFSKENKGSIDPYVYLPFGNGPRNCIGMRFALMNMKLALTKVLQNFSFQPCKETQI 472

  Fly   489 EFENSGIALI 498
            ..:.|...|:
  Rat   473 PLKLSRQGLL 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 159/476 (33%)
Cyp3a23-3a1NP_037237.2 p450 39..492 CDD:278495 167/503 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 256 1.000 Domainoid score I1960
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 274 1.000 Inparanoid score I2893
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
87.970

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