DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and Cyp26b1

DIOPT Version :10

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_780684.1 Gene:Cyp26b1 / 232174 MGIID:2176159 Length:512 Species:Mus musculus


Alignment Length:547 Identity:120/547 - (21%)
Similarity:212/547 - (38%) Gaps:140/547 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLAVTLLTLAWFYLKRHYEYWERR---------GFPFEKHS-GIPFGCLDSVW----------RQ 50
            |::||||      |....:.|:.|         ..|..|.| |.|.......|          |:
Mouse    19 LVSVTLL------LAVSQQLWQLRWAATRDKSCKLPIPKGSMGFPLIGETGHWLLQGSGFQSSRR 77

  Fly    51 EKSMGLAIYDVYVKSKERVLGIYLLFRPAVLIRDADLARRVLAQDFASFHDRGVYVDEERDPLSA 115
            ||      |.       .|...:||.||.:.:..|:..|::|..:                    
Mouse    78 EK------YG-------NVFKTHLLGRPLIRVTGAENVRKILLGE-------------------- 109

  Fly   116 NIFSLRGQSW-RSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAH--LQKELPEEGFKEVDIKKVM 177
              ..|....| ||.|.:|.|...:..:..:......:..|:.:|  |:..||:       |:.|:
Mouse   110 --HQLVSTEWPRSARVLLGPNTVANSIGDIHRNKRKVFSKIFSHEALESYLPK-------IQLVI 165

  Fly   178 QN---------YAIDIIAST---IFGLDVN---SFENPDNKFRKLVSLARANNRFNAMFGMMIFL 227
            |:         .||::....   .|.:.|.   .|..|:.....|..:.:       .|...:|.
Mouse   166 QDTLRAWSSQPEAINVYQEAQRLTFRMAVRVLLGFSIPEEDLGHLFEVYQ-------QFVENVFS 223

  Fly   228 VPSIAQFLFRIGFKNPVGLAMLQIVKETVE--YREK----HGIVRKDLLQLLIQLRNTGKIDEND 286
            :|....|   .|::.  |:...||:::.:|  .|||    .|....|.|.:||:      ..:..
Mouse   224 LPVDLPF---SGYRR--GIQARQILQKGLEKAIREKLQCTQGKDYSDALDILIE------SSKEH 277

  Fly   287 EKSFSIQKTPDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEV-DE 350
            .|..::|:..||.::.|             .|...||.|.:...|.:|.::|.:|::|::|: .:
Mouse   278 GKEMTMQELKDGTLELI-------------FAAYATTASASTSLIMQLLKHPAVLEKLREELRAQ 329

  Fly   351 TLAKN-----DGKITYDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPV 410
            .|...     :|.:..|:|:.:.:||..::|.:|.:  .|:.....|...|.......||||..|
Mouse   330 GLLHGGGCPCEGTLRLDTLSSLRYLDCVIKEVMRLF--TPVSGGYRTVLQTFELDGFQIPKGWSV 392

  Fly   411 VISLYGIHHDAEYFPDPETYDPERFSEESRNYNPTA---FMPFGEGPRICIAQRMGRINSKLAII 472
            :.|:...|..|..|.|...:||:||| ::|:.:...   ::|||.|.|.|:.:.:.::..|:..:
Mouse   393 MYSIRDTHDTAPVFKDVNVFDPDRFS-QARSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAV 456

  Fly   473 KILQNFNVEVMSRSEIEFENSGIALIP 499
            ::......|:.:|:   |..  |.|:|
Mouse   457 ELASTSRFELATRT---FPR--ITLVP 478

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 CYP6-like 66..504 CDD:410679 102/467 (22%)
Cyp26b1NP_780684.1 CYP26B1 60..490 CDD:410730 107/500 (21%)

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