DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6d4 and cyp-13A8

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_496115.1 Gene:cyp-13A8 / 188358 WormBaseID:WBGene00011674 Length:509 Species:Caenorhabditis elegans


Alignment Length:534 Identity:135/534 - (25%)
Similarity:257/534 - (48%) Gaps:49/534 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSLILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIP-FGCLDSVWRQEKSMGLAIYDVYVK 64
            :|.|||:::..      |...|:.:|:|||.|  ...|:| ||...::.......|..: ..:.|
 Worm     2 IFELILISIVT------YYFWHWTFWKRRGLP--GPWGVPIFGKAGAMLEDSFPPGYTL-QKWTK 57

  Fly    65 SKERVLGIYLLFRPAVLIRDADLARRVLAQDFASFHDR---GVYVDEERDPLSANIFSLRGQSWR 126
            ...::.|.....:..::|.|.||.:.:|.:.:.:|:.|   .|..|.::|. ..:|...:|..|:
 Worm    58 EYGKIYGFTEGMQKVMVISDPDLVQEILVKQYDNFYGRKHNPVQGDPDKDK-DIHIVGAQGFRWK 121

  Fly   127 SMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIASTIFG 191
            .:|.:.:|.|::|.:|.:.:|.||...:::..|::|  .|..|.|::....|.|..|:|:....|
 Worm   122 RLRTITAPAFSNGSIKKVLTTMEDSTQELMKKLREE--SENGKAVNMHLFYQEYTFDVISRVAMG 184

  Fly   192 L-DVNSFENPDNKFRKLVSLARANNRFNA-MF-GMMIFLVPSIAQFLFRIGFKNPVGLAMLQIVK 253
            . |...|:||   ..|.|.....:||:.. || |...|.|..:.....::|   ..|.....:|:
 Worm   185 QPDSQMFKNP---LLKDVKGFFEHNRWQIWMFSGGFPFAVSFLKWLFIKVG---KFGAGPFIVVQ 243

  Fly   254 ETV-----------EYREKHGI---VRKDLLQLLIQLRNTGKIDENDEKSFSIQKTPDGHIKTIS 304
            ::|           |..:|||:   ...|.:.:.:..|  .:::...|.:....|:...:.:.::
 Worm   244 KSVTDAVMSRIAQREADKKHGVEPGEAADYIDMFLNAR--AEVEHFGESNDEFHKSSSYNNRQLT 306

  Fly   305 LEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKITYDSLNKMEF 369
            .:.|.:|.|:|.:||.:||..:.::..|.||..|::..:||||||:. ..|| :||:|.|:|:::
 Worm   307 TQEIISQCFVFLVAGFDTTAISLSYVTYFLALNPKIQSKLQDEVDKE-CPND-EITFDQLSKLKY 369

  Fly   370 LDLCVQETIRKYPGLPILN-RECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYF-PDPETYDP 432
            :|..::|::|.:|.....| |.|.::..:.:  .::..|..|:|..:.:|||...: .|.|.:.|
 Worm   370 MDNVIKESLRLFPFASFANSRRCMRNTVIGE--QIVEAGVDVMIDTWTLHHDKNVWGNDVEEFKP 432

  Fly   433 ERFSEESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEIEFENSGIAL 497
            ||:  :|......|::.||.|||:|:..|...:..|..:..||:.:..|..:::::..:..|.|.
 Worm   433 ERW--DSPLTPQQAYLSFGAGPRVCLGMRFALLEQKGLLSHILKKYTFETNAKTQLPIKLVGRAT 495

  Fly   498 IPKHGVRVRLSKRV 511
            .....:.:.|..||
 Worm   496 ARPENLFLSLKPRV 509

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 116/463 (25%)
cyp-13A8NP_496115.1 p450 27..503 CDD:278495 122/495 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.820

Return to query results.
Submit another query.