DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and cyp-13A6

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_496113.1 Gene:cyp-13A6 / 188357 WormBaseID:WBGene00011673 Length:518 Species:Caenorhabditis elegans


Alignment Length:556 Identity:137/556 - (24%)
Similarity:262/556 - (47%) Gaps:90/556 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSLILLAVTLLTLAWFYLKRHYEYWER------RGFPFEKHSGIPFGCLDSVWRQEKSMGLAIY 59
            :.|.:||.|...:: |.     :.|:.|      ||||     ||  |.|......|....|...
 Worm     5 LLSAVLLGVFTYSV-WI-----WSYFIRKGIKGPRGFP-----GI--GMLIQTIDHENPPFLKYR 56

  Fly    60 DVYVKSKERVLGIYLLFRPAVLIRDADLARRVLAQDFASFHD---RGVYVDEERDPLSANIFSLR 121
            | :.|....|.|.....:..::|.:.::...:..:.|.:|:.   |.:..|.|:|. ..||||.:
 Worm    57 D-WTKQYGPVYGFTEGPQQTMIISEPEMVNEIFKKQFDNFYGRKLRPIIGDPEKDK-RVNIFSTQ 119

  Fly   122 GQSWRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIA 186
            |:.|:.:|.:.||.|::..|:.:.::.::.|.:::.::::::.:.  :::|:..|.|.|.:.:|:
 Worm   120 GKRWKRLRTLSSPSFSNNSLRKVRNSVQECGTEILWNIEQKVRKN--EDIDMLIVYQEYTLGVIS 182

  Fly   187 STIFG-LDVNSFENPDNKFRKLVSLARANNRFNAMFGMMIFLVPSI----------------AQF 234
            ....| .:.|.|:||        .|.:....||..:  .:||:..|                |.|
 Worm   183 RIALGQSESNMFKNP--------LLPKVQAIFNGSW--HVFLITGIFPPLAGVFRKMSKMLPASF 237

  Fly   235 L--FRIGFKNPVGLAMLQI-VKETVEYREKHGI------VRKDLLQLLIQLR------NTGKIDE 284
            :  |:|       ..:::: |:..::.|.|..|      ..:|.:.|.:..|      .:|:.:|
 Worm   238 IPAFKI-------FDLIEVAVQARIDQRAKDEIKGVEPGEPQDFIDLFLDARVPDVKILSGEANE 295

  Fly   285 NDEKSFSIQKTPDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVD 349
            :..|| |:.|..    |.::.:.|.||.|:|..||.:||..:.::..|.||.:||:..:||:|||
 Worm   296 DFAKS-SVVKIN----KELTFDEIIAQCFVFLAAGFDTTALSLSYATYLLATHPEIQTKLQEEVD 355

  Fly   350 ETLAKNDGKITYDSLNKMEFLDLCVQETIRKYP-GLPILNRECTQDYTVPDTNHVIPKGTPVVIS 413
            ....  |.:|.:|.|:|:::|:..::||:|.|| |.....|:|.::.|:...|  ..:|..:.:.
 Worm   356 RECP--DPEIFFDHLSKLKYLECVMKETLRLYPLGTTANTRKCMRETTINGVN--FDEGMNIQVD 416

  Fly   414 LYGIHHDAEYF-PDPETYDPERFSE---ESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKI 474
            .:.:||:...: .|.|.:.|||:..   |...:| .:::|||.|||.||..|:.::..|:.:.:|
 Worm   417 TWTLHHNPRIWGEDVEDFKPERWENGACEHLEHN-GSYIPFGSGPRQCIGMRLAQMEQKILLAQI 480

  Fly   475 LQNFNVEVMSRSEIEFENSGIALIPKHGVRVRLSKR 510
            |:.::......::|..:..|...:....|.|:|..|
 Worm   481 LKEYSFRTTKNTQIPVKLVGKLTLSPESVIVKLEPR 516

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 116/481 (24%)
cyp-13A6NP_496113.1 p450 31..508 CDD:278495 126/514 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I2666
Isobase 1 0.950 - 0 Normalized mean entropy S3516
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
109.820

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