DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and cyp-13B1

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_510233.1 Gene:cyp-13B1 / 181462 WormBaseID:WBGene00008519 Length:510 Species:Caenorhabditis elegans


Alignment Length:543 Identity:145/543 - (26%)
Similarity:244/543 - (44%) Gaps:65/543 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MFSLILLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIPF-GCLDSVWRQEKSMGLAIYDVYVK 64
            |.::|:|.|...|:|. |.|..:.||.|||  .....|:|| |....:....|..|..|:. :.:
 Worm     1 MGAIIVLVVLFATIAG-YFKWIHTYWRRRG--ISGPEGLPFIGNYYDLADVNKPRGYLIHK-WTQ 61

  Fly    65 SKERVLGIYLLFRPAVLIRDADLARRVLAQDFASF-------HDRGVYVDEERDPLSANIFSLRG 122
            ...:|.|.|....|.:::.|.|:.:.:..:.|.:|       |..|.....:.:| ..|:|:.||
 Worm    62 KFGKVFGYYEGAVPVLVVSDMDMLQELFLKKFDNFYARKSTNHIHGNLECSKSEP-RINLFTSRG 125

  Fly   123 QSWRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIAS 187
            ..|:.:|.:.||.|:...||.:....||....||..:.|.  |:| |..:|....|.:..|:|:.
 Worm   126 ARWKRLRALASPGFSVKALKQVHDVMEDSAINMVDLMAKH--EDG-KPFNIHAYFQEFTYDVISR 187

  Fly   188 TIFGLDVNS--FENPDNKFRKLVSLARANNRFNAMFGMMIFLVPSIAQFLFRIGFKNPVGL---- 246
            ...| ..||  |.|...:..|  |:....:|....:..::|  |.....:.|: |.|...:    
 Worm   188 LAMG-QPNSELFNNSGVEIVK--SIFMRTHRVLPWYFTVLF--PQFEHLVKRM-FYNHAAVQGGD 246

  Fly   247 --AMLQIVKETVEYREKHGIVRKDLLQLLIQLR-NTGKID-ENDEKSF----------SIQKTPD 297
              .:|.|.|:|||.|              ||.| ...|:. ||.|..|          .::....
 Worm   247 IEKLLLICKKTVESR--------------IQEREENAKLGFENAENDFIDMFLNYYSEQVEDIEF 297

  Fly   298 GHI--KTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKIT 360
            |..  |.::.|.:....|:|.:||.:||.::.|:..|.||::||.:|..|:|||..:...:  ::
 Worm   298 GSTVEKKVTAEDVIGACFVFLLAGFDTTANSLAYASYLLAKHPEKMKLAQEEVDTVVGSEN--VS 360

  Fly   361 YDSLNKMEFLDLCVQETIRKYP-GLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYF 424
            ||.:.|:::||..|:|::|.|| .....:|||.:..|:.|.  .|.||..:...:..:|...|.:
 Worm   361 YDDMTKLKYLDAVVRESLRLYPVAWFACSRECVKPTTLGDI--YIDKGVKIEADVMSLHRSKEIW 423

  Fly   425 -PDPETYDPERFSEESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEI 488
             .:.:.:.|||:.|.|..:. .:::|||.|||.|:..|:|...:|.|:..:|:.:::.....:|.
 Worm   424 GENADDFVPERWLEPSSRHT-MSWIPFGAGPRQCVGMRLGLSEAKTALAHLLRRYDLVAGVETEK 487

  Fly   489 EFENSGIALIPKHGVRVRLSKRV 511
            |....|........|.:.|..|:
 Worm   488 ELNILGCTTTSPEAVTLYLKPRI 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 123/472 (26%)
cyp-13B1NP_510233.1 p450 31..479 CDD:306555 126/477 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 171 1.000 Domainoid score I2249
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264519at33208
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 1 1.000 - - mtm4759
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.920

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