DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cyp6d4 and Cyp3a13

DIOPT Version :9

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_031845.1 Gene:Cyp3a13 / 13113 MGIID:88610 Length:503 Species:Mus musculus


Alignment Length:532 Identity:167/532 - (31%)
Similarity:274/532 - (51%) Gaps:75/532 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLAVTLLTLAWFYLKRHYEYWERRGFPFEKHSGIPFGCLDSVWRQEKSMGLAIYDVYVKSK-ERV 69
            :|..|.|.|.:.|....:..:::.|.|..|  .:||  |.::...:|  |....|:....| .::
Mouse    13 MLLATSLVLLYLYGTHSHGIFKKLGIPGPK--PLPF--LGTILAYQK--GFWECDIQCHKKYGKM 71

  Fly    70 LGIYLLFRPAVLIRDADLARRVLAQD-FASFHDR------GVYVDEERDPLSANIFSLRGQSWRS 127
            .|:|...:|.:.|.|.|:.:.||.:: :::|.:|      |:        |...|.....:.|:.
Mouse    72 WGLYDGRQPVLAITDPDIIKTVLVKECYSTFTNRRRFGPVGI--------LKKAISISENEEWKR 128

  Fly   128 MRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDIIASTIFGL 192
            :|.:|||.||||:||.||.......|.:|.::::.|.|.  |...:|.:...|::|:|.:|.||:
Mouse   129 IRALLSPTFTSGRLKEMFPIINQFTDVLVRNMRQGLGEG--KPTSMKDIFGAYSMDVITATSFGV 191

  Fly   193 DVNSFENPDNKFRKLVSLARANNRFNAMFGMMIFLVPSIAQFLFRIGFKNPVGLAM--------- 248
            :::|..||.:.|.:.:......:.|:.:| :.:.|.|          |..||..|:         
Mouse   192 NIDSLNNPQDPFVEKIKKLLKFDIFDPLF-LSVTLFP----------FLTPVFDALNVSLFPRDV 245

  Fly   249 -------LQIVKET-VEYREKHGIVRKDLLQLLIQLRNTGKIDENDEKSFSIQKTPDGHIKTISL 305
                   ::.:||. ::.:||.   |.|.|||:|..:|              .||.:.| |.:|.
Mouse   246 ISFFTTSVERMKENRMKEKEKQ---RVDFLQLMINSQN--------------YKTKESH-KALSD 292

  Fly   306 EAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKITYDSLNKMEFL 370
            ..|.||:.||..||.|||.|..:|.:|.||.:|::.|:||||:|..| .|....|||:|.:||:|
Mouse   293 VEIVAQSVIFIFAGYETTSSALSFALYLLAIHPDVQKKLQDEIDAAL-PNKAPATYDTLLQMEYL 356

  Fly   371 DLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYFPDPETYDPERF 435
            |:.|.||:|.||....|.|.|..|..:  ....|||||.|:|..:.:|.|.:|:|:||.:.||||
Mouse   357 DMVVNETLRLYPIAGRLERVCKTDVEI--NGLFIPKGTVVMIPTFALHKDPKYWPEPEEFRPERF 419

  Fly   436 SEESR-NYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEIEFENSGIALI- 498
            |:::: :.||..::|||.|||.||..|...||.|:|::::||||.|:....:||..:.|...|: 
Mouse   420 SKKNQDSINPYMYLPFGSGPRNCIGMRFALINMKVALVRVLQNFTVQPCKETEIPLKLSKQGLLQ 484

  Fly   499 PKHGVRVRLSKR 510
            |::.:.:::..|
Mouse   485 PENPLLLKVVSR 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 p450 58..500 CDD:278495 152/468 (32%)
Cyp3a13NP_031845.1 p450 39..491 CDD:365848 160/499 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0158
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000037
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X40
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.810

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