DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp6d4 and Cyp4v3

DIOPT Version :10

Sequence 1:NP_651082.1 Gene:Cyp6d4 / 42682 FlyBaseID:FBgn0039006 Length:515 Species:Drosophila melanogaster
Sequence 2:NP_598730.1 Gene:Cyp4v3 / 102294 MGIID:2142763 Length:525 Species:Mus musculus


Alignment Length:546 Identity:138/546 - (25%)
Similarity:236/546 - (43%) Gaps:90/546 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LLAVTLLTLAWFYLKRHYEYWER-RGFPFEKHSGIPFGCLDSVWRQEKSMGLAIYD--------- 60
            |...|:|...:..|..:...|:: |..|             ||.|....:|.|:|.         
Mouse    24 LAGATILISIFPMLVSYARKWQQMRSIP-------------SVARAYPLVGHALYMKPNNAEFFQ 75

  Fly    61 --VYVKSKERVLGIYLLF---RPAVLIRDADLARRVLAQDFASFHDRGVYVDEERDPLSANIFSL 120
              :|...:.|.|.|..|:   .|.|.:..|:....:|..  :...|:.......:..|...:.:.
Mouse    76 QLIYYTEEFRHLPIIKLWIGPVPLVALYKAENVEVILTS--SKQIDKSFLYKFLQPWLGLGLLTS 138

  Fly   121 RGQSWRSMRHMLSPCFTSGKLKSMFSTSEDIGDKMVAHLQKELPEEGFKEVDIKKVMQNYAIDII 185
            .|..||:.|.||:|.|....|::......:..:.:|..|:|.:.:|.|   :....:...|:|||
Mouse   139 TGSKWRTRRKMLTPTFHFTILENFLDVMNEQANILVNKLEKHVNQEAF---NCFFYITLCALDII 200

  Fly   186 ASTIFGLDVNSFENPDNKFRKLVSLARANNRFNAMF---GMMIFLVPSIAQFLFRIGFKNPVGLA 247
            ..|..|.::.:..|.|:::      .|...|.:.|.   ..|.:|...:...:|:.|..:..||.
Mouse   201 CETAMGKNIGAQSNNDSEY------VRTVYRMSDMIYRRMKMPWLWFDLWYLVFKEGRDHKRGLK 259

  Fly   248 ML-----QIVKETVEYREK--------HGIV-----RKDLLQLLIQLRNTGKIDENDEKSFSIQK 294
            .|     .::.|.|:.|:.        .|.:     ||..|.||:.:        .||:.     
Mouse   260 CLHTFTNNVIAERVKERKAEEDWTGAGRGPIPSKNKRKAFLDLLLSV--------TDEEG----- 311

  Fly   295 TPDGHIKTISLEAITAQAFIFYIAGQETTGSTAAFTIYELAQYPELLKRLQDEVDETLAKNDGKI 359
                  ..:|.|.|..:...|...|.:||.:...:::|.|...||:.:::..|:||...::...:
Mouse   312 ------NRLSQEDIREEVDTFMFEGHDTTAAAINWSLYLLGTNPEVQRKVDQELDEVFGRSHRPV 370

  Fly   360 TYDSLNKMEFLDLCVQETIRKYPGLPILNRECTQDYTVPDTNHVIPKGTPVVISLYGIHHDAEYF 424
            |.:.|.|:::||..::||:|.:|.:|:..|..::|..|  ..:.:.|||..:|..|.:|.|..||
Mouse   371 TLEDLKKLKYLDCVIKETLRVFPSVPLFARSLSEDCEV--GGYKVTKGTEAIIIPYALHRDPRYF 433

  Fly   425 PDPETYDPER-FSEESRNYNPTAFMPFGEGPRICIAQRMGRINSKLAIIKILQNFNVEVMSRSEI 488
            ||||.:.||| |.|.|:..:|.|::||..|||.||.|:...:..|..:..||:.|.||    |..
Mouse   434 PDPEEFRPERFFPENSQGRHPYAYVPFSAGPRNCIGQKFAVMEEKTILACILRQFWVE----SNQ 494

  Fly   489 EFENSGIA----LIPKHGVRVRLSKR 510
            :.|..|:|    |.|.:|:.::|.:|
Mouse   495 KREELGLAGDLILRPNNGIWIKLKRR 520

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp6d4NP_651082.1 CYP6-like 66..504 CDD:410679 122/466 (26%)
Cyp4v3NP_598730.1 CYP4V 76..515 CDD:410773 123/474 (26%)

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