DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and Duox1

DIOPT Version :10

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_001092767.1 Gene:Duox1 / 99439 MGIID:2139422 Length:1551 Species:Mus musculus


Alignment Length:630 Identity:181/630 - (28%)
Similarity:276/630 - (43%) Gaps:129/630 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 RRSTGVCNNKQHPRTYGASMVPYRRMVSPDYADGIAAPRVSHHGRLPPARQVSLKIHRSSYETDS 283
            :|..|..||....| :|:.....:|:|...||||:..|....:  ||..|.:|.::.|.|....|
Mouse    30 QRFDGWYNNLMEHR-WGSKGSRLQRLVPASYADGVYQPLKEPY--LPNPRHLSNRVMRGSAGQPS 91

  Fly   284 --NFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDIL-----PDDPYY- 340
              |.||:...||..:..|:.:.                    :.|.| |.:.|     ..||.: 
Mouse    92 LRNRTVLGVFFGYHVLSDLVSV--------------------ETPGC-PAEFLNIYIPHGDPVFD 135

  Fly   341 --KQYNISCMNFVRSA-PAPTGR--FGPRMQLNQATAFIDASVVYGNLEQRQNQLRSFINGSLR- 399
              |:.|: .:.|.||. ...||:  ..||.|.||.|.::|.|.:||:.....:.||||..|.|. 
Mouse   136 PDKRGNV-VLPFQRSRWDRNTGQSPSNPRDQSNQVTGWLDGSAIYGSSHSWSDTLRSFSGGQLAS 199

  Fly   400 ----MFVTDDGRQLLP-ISSNPADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLLWARHHNY 459
                .|.:|....||. ::.:|:.|    |....|.|.|  |..|.|....|.::.|||.|:||.
Mouse   200 GPDPAFPSDSQSSLLMWMAPDPSTG----QGGPRGVYAF--GAQRGNREPFLQALGLLWFRYHNL 258

  Fly   460 LARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNLNAPDTY 524
            .||:|.:::|||.||.|:|.|||.:.|...:|...|:||..|.:...|..|             |
Mouse   259 CARKLAQEHPHWGDEELFQHARKRVIATYQNIAMYEWLPSFLKQTPPEYPG-------------Y 310

  Fly   525 DPEVDPSIANCFAAAAFRFAHTLLP-GLF--NI--------SRDNSTPEAIELHKMLFNPFSLWA 578
            .|.:||||:..|..|:.:|..|::| |::  |.        |.::|...|:.:..      |.|:
Mouse   311 RPFLDPSISPEFVVASEQFLSTMVPSGVYMRNASCHFQGIPSHNSSVSGALRVCN------SYWS 369

  Fly   579 -EH-------GIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAEDRVPL--CGLDLVSLNIQRG 633
             ||       .:| ||:....:.:.:.:....:|..|..:.|      ||  ...|.::..:|||
Mouse   370 REHPKLQRAEDVD-ALLLGMASQIAEREDHVVVEDMQDFWPG------PLKFSRTDYLASCLQRG 427

  Fly   634 RDHGIPSYPVFRRHCRLPTVDTWEEMSQAI--DNAT-LDSIRQIYESPQD---VDVYTGALSEPP 692
            ||.|:|||...|....|..:..|::::.|:  .|.| |::...:|.  ||   :::..|.|.|..
Mouse   428 RDLGLPSYTKAREALGLSPISHWQDINPALSRSNGTVLEATAALYN--QDLSRLELLPGGLLESH 490

  Fly   693 LDGAIFGPLLSCMVSDQFLRLKLGDSHWYERKMGPQKFTKAQLAEIYKTSLAAIICRNSDGITRV 757
            .|.   |||.|.:|.|||:||:.||.:|:|.... ..|:|.::|||..|||..|:.    .:|.|
Mouse   491 GDP---GPLFSTIVLDQFVRLRDGDRYWFENTRN-GLFSKEEIAEIRNTSLRDILV----AVTNV 547

  Fly   758 REHVMQRLRDGGNPHVDCQDLEGFHFNFEPWSEKQQPQDLHSAGI 802
            ....:|       |:|         |.:.......||..|.:.|:
Mouse   548 DPSALQ-------PNV---------FFWLAGDPCPQPSQLSAKGL 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 173/588 (29%)
Duox1NP_001092767.1 dual_peroxidase_like 32..591 CDD:188652 180/628 (29%)
EFh 820..881 CDD:238008
EFh 857..915 CDD:238008
PLN02292 1089..>1412 CDD:215165
NOX_Duox_like_FAD_NADP 1277..1551 CDD:99783
Blue background indicates that the domain is not in the aligned region.

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