DRSC/TRiP Functional Genomics Resources

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Protein Alignment cd and RBOHD

DIOPT Version :10

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_199602.1 Gene:RBOHD / 834842 AraportID:AT5G47910 Length:921 Species:Arabidopsis thaliana


Alignment Length:449 Identity:92/449 - (20%)
Similarity:156/449 - (34%) Gaps:137/449 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 ETTPLTDAVPSGSGYVVLPPYQGPERVFPGGVSPRARRNKMRQFQCCMGITFIAIVFTALCLALV 68
            :|...|:::.|..|     .:.||.     |...||.:...|                       
plant    23 DTNSDTESIASDRG-----AFSGPL-----GRPKRASKKNAR----------------------- 54

  Fly    69 FSDSL----GGADGGPSFFFVVNGSDSELAP-NRPLPDEPAAEWALQQAA--LGHHDGAQAVSAG 126
            |:|.|    ....||       .|.|.|... ...:.|:..|..::||||  .||.:..:.    
plant    55 FADDLPKRSNSVAGG-------RGDDDEYVEITLDIRDDSVAVHSVQQAAGGGGHLEDPEL---- 108

  Fly   127 IKALGDREILEEGLQPNEVNTPSFRHYRSLSTNPE--ARKLARRGYVENQATIDIAKRFNYT--- 186
              ||..::.||..|.    ||.|...:||.|:..:  :|:|.|   |.::......:||:.|   
plant   109 --ALLTKKTLESSLN----NTTSLSFFRSTSSRIKNASRELRR---VFSRRPSPAVRRFDRTSSA 164

  Fly   187 --------KQPGRSNIGWGPKIVLPDPTVLRLECDFN-----ARYRRSTGVCNNKQHPRTYGASM 238
                    |........| |.:   |....:|..|.|     |::....|:  ||:         
plant   165 AIHALKGLKFIATKTAAW-PAV---DQRFDKLSADSNGLLLSAKFWECLGM--NKE--------- 214

  Fly   239 VPYRRMVSPDYADGI---AAPRVSHHGRLPPARQVSLKIHRSSYETDSNFTVMLAVFGQFMDHDI 300
                   |.|:||.:   .|.|.:..|......|:.:...:.|   |.:|...|.||...:|.|.
plant   215 -------SKDFADQLFRALARRNNVSGDAITKEQLRIFWEQIS---DESFDAKLQVFFDMVDKDE 269

  Fly   301 TATSLTTSQEGESIDCCVAATR----EQHPECYPVDILPD-DP----YYKQYNISCMNFVRSAPA 356
            .. .:|..:..|.|....:|.:    ::..:.|...|:.: ||    :....|:..:  :..|| 
plant   270 DG-RVTEEEVAEIISLSASANKLSNIQKQAKEYAALIMEELDPDNAGFIMIENLEML--LLQAP- 330

  Fly   357 PTGRFGPRMQLNQATAFIDASVVYGNLEQR------QNQLRSFINGSLRMFVTDDGRQL 409
                       ||:....|:.::...|.|:      .|.|..: :..::.|:.|:.::|
plant   331 -----------NQSVRMGDSRILSQMLSQKLRPAKESNPLVRW-SEKIKYFILDNWQRL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 40/210 (19%)
RBOHDNP_199602.1 NADPH_Ox 158..256 CDD:462469 24/122 (20%)
EFh <237..283 CDD:238008 11/49 (22%)
EF-hand_7 255..317 CDD:463900 13/62 (21%)
PLN02844 <425..>758 CDD:215453
NOX_Duox_like_FAD_NADP 619..921 CDD:99783
NAD_binding_6 736..903 CDD:429792
Blue background indicates that the domain is not in the aligned region.

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