DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and pxdn

DIOPT Version :9

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_001076815.1 Gene:pxdn / 493201 XenbaseID:XB-GENE-923300 Length:1460 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..755 CDD:281139
peroxinectin_like 364..750 CDD:188655
pxdnNP_001076815.1 leucine-rich repeat 38..56 CDD:275380
LRR <54..235 CDD:227223
leucine-rich repeat 57..80 CDD:275380
LRR_8 104..163 CDD:338972
leucine-rich repeat 105..128 CDD:275378
leucine-rich repeat 129..152 CDD:275378
leucine-rich repeat 153..176 CDD:275378
leucine-rich repeat 177..189 CDD:275378
I-set 239..326 CDD:369462
I-set 335..422 CDD:369462
Ig3_Peroxidasin 439..512 CDD:143222
Ig4_Peroxidasin 535..603 CDD:143223
peroxidasin_like 856..1295 CDD:188658
VWC 1402..1452 CDD:214564
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D276568at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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