DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and Duox2

DIOPT Version :9

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_001349684.1 Gene:Duox2 / 214593 MGIID:3036280 Length:1545 Species:Mus musculus


Alignment Length:639 Identity:174/639 - (27%)
Similarity:274/639 - (42%) Gaps:150/639 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   219 RRSTGVCNN-KQHPRTYGASMVPYRRMVSPDYADGIAAPRVSHHGRLPPARQVSLKIHRSSYETD 282
            :|..|..|| |.|.|  ||:....||::..:||||:.  :......||..|::|..:.:......
Mouse    36 QRYDGWFNNLKYHQR--GAAGSRLRRLIPANYADGVY--QALEEPLLPNPRRLSDAVAKGKAGLP 96

  Fly   283 S--NFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDIL-----PDDPYY 340
            |  |.||:...||..:..|:.:.                    :.|.| |.:.|     ..||.:
Mouse    97 SVHNRTVLGVFFGYHVLSDLVSV--------------------ETPGC-PAEFLNIYIPRGDPVF 140

  Fly   341 ---KQYNISCMNFVRS------APAPTGRFGPRMQLNQATAFIDASVVYGNLEQRQNQLRSFING 396
               |:.|: .:.|.||      ..:|:   .||.|.||.|.::|.|.:||:.....:.||||..|
Mouse   141 DPDKRGNV-VLPFQRSRWDHNTGQSPS---NPRDQSNQVTGWLDGSAIYGSSHSWSDTLRSFSGG 201

  Fly   397 SLR-----MFVTDDGRQLLP-ISSNPADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLLWAR 455
            .|.     .|..:....||. ::.:|:.|....|    |.|.|  |..|.|....|.::.|||.|
Mouse   202 QLASGPDPAFPRNSQSSLLMWMAPDPSTGRGGPQ----GVYAF--GAQRGNREPFLQALGLLWFR 260

  Fly   456 HHNYLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNLNA 520
            :||..||:|.:::|||.||.|:|.|||.:.|...:|...::||..|.|...|..|          
Mouse   261 YHNLCARKLAQEHPHWGDEELFQHARKRVIATYQNIALYQWLPSFLQKTPPEYSG---------- 315

  Fly   521 PDTYDPEVDPSIANCFAAAAFRFAHTLL-PGLFNISRDNSTPEAIELHKMLFNPFSLWAEHGIDH 584
               |.|.:||||:..|..|:.:|..|:: ||::  .|::|      .|      |..:.:.|.| 
Mouse   316 ---YRPFMDPSISPEFVVASEQFLSTMVPPGVY--MRNSS------CH------FRKFPKEGSD- 362

  Fly   585 ALMTAANTPVMQVDRFF------SLEVTQ---KLFEGTA------EDRVPLCGL----------- 623
                  ::|.::|...:      :|:..|   :|..|.|      |||:.:..|           
Mouse   363 ------SSPALRVCNSYWIRENPNLKTAQDVDQLLLGMASQISELEDRIVIEDLRDYWPGPERFS 421

  Fly   624 --DLVSLNIQRGRDHGIPSYPVFRRHCRLPTVDTWEEMSQAIDNATLDSIRQIYESPQD---VDV 683
              |.|:.:||||||.|:|||........|.....|..::..::...|::...:|.  ||   :::
Mouse   422 RTDYVASSIQRGRDMGLPSYSQALLALGLEPPKNWSALNPQVEPQVLEATAALYN--QDLSQLEL 484

  Fly   684 YTGALSEPPLDGAIFGPLLSCMVSDQFLRLKLGDSHWYERKMGPQKFTKAQLAEIYKTSLAAIIC 748
            ..|.|.|...|.   |||.|.::.|||:||:.||.:|:|.... ..|:|.::|||..|:|..::.
Mouse   485 LLGGLLESHGDP---GPLFSNIILDQFVRLRDGDRYWFENTRN-GLFSKEEIAEIRNTTLRDVLV 545

  Fly   749 RNSDGITRVREHVMQRLRDGGNPHVDCQDLEGFHFNFEPWSEKQQPQDLHSAGI 802
            ..|                    :||...|:...|.::..:...||:.|.:.|:
Mouse   546 AVS--------------------NVDPSALQPNVFFWQEGAPCPQPRQLTTDGL 579

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..755 CDD:281139 166/590 (28%)
peroxinectin_like 364..750 CDD:188655 126/423 (30%)
Duox2NP_001349684.1 dual_peroxidase_like 38..594 CDD:188652 173/637 (27%)
EFh 824..885 CDD:238008
EFh 861..919 CDD:238008
Ferric_reduct 1085..1229 CDD:366815
NOX_Duox_like_FAD_NADP 1271..1545 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

Return to query results.
Submit another query.