DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment cd and duox-2

DIOPT Version :9

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:NP_490684.1 Gene:duox-2 / 186188 WormBaseID:WBGene00018771 Length:1503 Species:Caenorhabditis elegans


Alignment Length:618 Identity:166/618 - (26%)
Similarity:279/618 - (45%) Gaps:103/618 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   216 ARYRRSTGVCNNKQHPRTYGASMVPYRRMVSPDYADGIAAPRVSHHGRLPPARQVS--LKIHRSS 278
            |..:|..|..||..:.. :|::.....|.....|:||:    .|.:..||.||::|  |....|.
 Worm    36 AETQRYDGWYNNLANSE-WGSAGSRLHRDARSYYSDGV----YSVNNSLPSARELSDILFKGESG 95

  Fly   279 YETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAATREQHPECYPVDILPDD------ 337
            .......|.:||.|.|.:.::|        .:...:.|.:...:.|.|.|   |.:.|:      
 Worm    96 IPNTRGCTTLLAFFSQVVAYEI--------MQSNGVSCPLETLKIQVPLC---DNVFDNECEGKT 149

  Fly   338 --PYYK-QYNISCMNFVRSAPAPTGRFGPRMQLNQATAFIDASVVYGNLEQRQNQLRSFINGSLR 399
              |:|: :|:.:..|.:.|         ||.|:|:.|::||.|.:||..:...:.||||..|.|.
 Worm   150 TIPFYRAKYDKATGNGLNS---------PREQINERTSWIDGSFIYGTTQPWVSALRSFKQGRLA 205

  Fly   400 MFVTDDGRQLLPISSNPADGCNR---VQMTRL--GKYCFESGDDRANENLLLTSMHLLWARHHNY 459
                 :|....|..:||....|.   .|:.||  ....|..||.|.|||..|.|..|:..|.|||
 Worm   206 -----EGVPGYPPLNNPHIPLNNPAPPQVHRLMSPDRLFMLGDSRVNENPGLLSFGLILFRWHNY 265

  Fly   460 LARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKNISEAKGLLPAKHNLNAPDTY 524
            .|.|:..::|.|.||:::|.||:::.|.|..|...:|:|.|||:::           .|:....|
 Worm   266 NANQIYREHPDWTDEQIFQAARRLVIASMQKIIAYDFVPGLLGEDV-----------RLSNYTKY 319

  Fly   525 DPEVDPSIANCFAAAAFRFAHTLLPGLFNISRDNSTPE---------AIELHKMLFNPFSLWAEH 580
            .|.|.|.|::.|.||||||.|:::|....:.:..:..|         |:.|.:..:|...:..|:
 Worm   320 MPHVPPGISHAFGAAAFRFPHSIVPPAMLLRKRGNKCEFRTEVGGYPALRLCQNWWNAQDIVKEY 384

  Fly   581 GIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRDHGIPSYPVFR 645
            .:|..::..|:....:.|.....::...:|......|     ||:|:.:|.||||:|:|.|...|
 Worm   385 SVDEIILGMASQIAERDDNIVVEDLRDYIFGPMHFSR-----LDVVASSIMRGRDNGVPPYNELR 444

  Fly   646 RHCRLPTVDTWEEMSQAI---DNATLDSIRQIY-ESPQDVDVYTGALSEPPLDGAIFGP--LLSC 704
            |...| ...|||.|::..   ..|.::.::::| .:...:|.|.|.:    |:|...||  :...
 Worm   445 RTFGL-APKTWETMNEDFYKKHTAKVEKLKELYGGNILYLDAYVGGM----LEGGENGPGEMFKE 504

  Fly   705 MVSDQFLRLKLGDSHWYERKMGPQKFTKAQLAEIYKTSLAAIICRNSDGITRVREHVMQRLRDGG 769
            ::.|||.|::.||..|:|.|:. :.||..::..|:..:|..||...:|    :.|.::|:     
 Worm   505 IIKDQFTRIRDGDRFWFENKLN-RLFTDEEVQMIHSITLRDIIKATTD----IDETMLQK----- 559

  Fly   770 NPHVDCQDLEGFHFNFEPWSEKQQPQDLHSAGI 802
                   |:    |.|:......||..:::.|:
 Worm   560 -------DV----FFFKEGDPCPQPFQVNTIGL 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..755 CDD:281139 157/567 (28%)
peroxinectin_like 364..750 CDD:188655 121/405 (30%)
duox-2NP_490684.1 An_peroxidase 39..552 CDD:281139 157/568 (28%)
dual_peroxidase_like 41..596 CDD:188652 164/613 (27%)
FRQ1 792..>895 CDD:227455
Ferric_reduct 1041..1182 CDD:280043
NOX_Duox_like_FAD_NADP 1224..1408 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.