DRSC/TRiP Functional Genomics Resources

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Protein Alignment cd and duox2

DIOPT Version :9

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:XP_017947900.2 Gene:duox2 / 100486050 XenbaseID:XB-GENE-6047411 Length:1517 Species:Xenopus tropicalis


Alignment Length:618 Identity:164/618 - (26%)
Similarity:263/618 - (42%) Gaps:93/618 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   194 IGWGPKIVLPDPTVLRLECDFNARYRRSTGVCNNKQHPRTYGASMVPYRRMVSPDYADGIAAPRV 258
            :||         |.|....|.|...:|..|..||..:..| |:......|.:...|.||:.  :|
 Frog    11 LGW---------TYLVDANDINWEVQRYDGWYNNLAYHST-GSPGSKLLRHIPAFYTDGVY--QV 63

  Fly   259 SHHGRLPPARQVSLKI--HRSSYETDSNFTVMLAVFGQFMDHDITATSLTTSQEGESIDCCVAAT 321
            .....||..|.:|..:  .:|...:..|.|||...||..:..::..|..         ..|.|  
 Frog    64 PKEPELPNPRSISNVVTKGKSGLPSSRNLTVMAISFGYHVLSEVVYTGK---------PACPA-- 117

  Fly   322 REQHPECYPVDILPDDPYYKQYNIS--CMNFVRSAPAP-TGRF--GPRMQLNQATAFIDASVVYG 381
                 |...::|...|..:.:.|.|  .:.|.||...| |||.  .||..:|..:|:||.|.:||
 Frog   118 -----EFLNIEIPKGDLVFDRTNTSKVVIPFQRSKWYPDTGRSPNNPRDHVNSVSAWIDGSSIYG 177

  Fly   382 NLEQRQNQLRSFINGSLRMFVTDDG-----RQLLPI--SSNPADGCNRVQMTRLGKYCFESGDDR 439
            :.....:.||:|..|.|.. ..|:|     :..||:  ..||:.|    :....|.|.|  |:.|
 Frog   178 SSHSWCDALRNFSGGKLAS-GPDEGVPRFAKSDLPMWKVPNPSTG----ETGNNGLYAF--GNAR 235

  Fly   440 ANENLLLTSMHLLWARHHNYLARQLQEQNPHWEDERLYQEARKILGAQMAHITYNEFLPVLLGKN 504
            |||:..|.|:.:||.|:|||.|::..::||.|.||.|:|.|||.:.|...:|.:.|:||..|.:|
 Frog   236 ANESPFLQSLGILWFRYHNYKAQEFAKENPEWSDEVLFQHARKWVIAVYQNIVFYEWLPAFLSRN 300

  Fly   505 ISEAKGLLPAKHNLNAPDTYDPEVDPSIANCFAAAAFRFAHTLLP-GLF---------NISRDN- 558
            ::..||             |...|||||:..|.....:..:|::| |::         |:|..| 
 Frog   301 VTAYKG-------------YQQHVDPSISPVFTVQLSQMIYTMMPSGIYMRNKDCNFQNVSGSNG 352

  Fly   559 STPEAIELHKMLFN--PFSLWAEHGIDHALMTAANTPVMQVDRFFSLEVTQKLFEGTAEDRVPLC 621
            |...|:.|....:|  ..:|......|..||..|:....:.|.....::|...:     .::...
 Frog   353 SVWPALRLCNNYWNRENSNLKNSSSTDEILMGMASQIAEKEDNILVNDLTDYCY-----GQIKYS 412

  Fly   622 GLDLVSLNIQRGRDHGIPSYPVFRRHCRLPTVDTWEEMSQAIDNATLDSIRQIY-ESPQDVDVYT 685
            ..||.:.:|...||.|:|:|.....:.:.|.::.||:|:   |......:..:| ...:.::...
 Frog   413 RTDLFAASILHARDLGLPNYNKVCEYYQCPLLENWEKMT---DKELGKKLASLYGNDTEKLEFIP 474

  Fly   686 GALSEPPLDGAIFGPLLSCMVSDQFLRLKLGDSHWYER-KMGPQKFTKAQLAEIYKTSLAAIICR 749
            |.|:|...:...|   .|.:|.:||.||:.||..|:|. |.|  .|:|..:..|....|..::..
 Frog   475 GLLAEMAGNSINF---FSDIVLEQFYRLRDGDRFWFENVKNG--LFSKKDIDNIRNIKLQNVLVA 534

  Fly   750 NSDGITRVREHVMQRLRDGGNP---HVDCQDLE 779
            .:|....::::|.....|...|   .:..::||
 Frog   535 VTDAGDTIQQNVFFLKEDDPCPQPKQLQSEELE 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..755 CDD:281139 153/565 (27%)
peroxinectin_like 364..750 CDD:188655 114/407 (28%)
duox2XP_017947900.2 dual_peroxidase_like 29..581 CDD:188652 157/591 (27%)
FRQ1 726..918 CDD:227455
PLN02292 1056..>1376 CDD:215165
NOX_Duox_like_FAD_NADP 1244..1517 CDD:99783
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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