DRSC/TRiP Functional Genomics Resources

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Protein Alignment cd and tpo

DIOPT Version :10

Sequence 1:NP_651081.1 Gene:cd / 42681 FlyBaseID:FBgn0263986 Length:830 Species:Drosophila melanogaster
Sequence 2:XP_031758614.1 Gene:tpo / 100036738 XenbaseID:XB-GENE-920152 Length:872 Species:Xenopus tropicalis


Alignment Length:736 Identity:240/736 - (32%)
Similarity:364/736 - (49%) Gaps:112/736 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 IKALGDREILEEGLQPNEVNTPSFRHYRSLSTNPEARKLARRGYVENQATIDIAKRFNYTKQPGR 191
            :|:.|..::.|..:..|..:..|..|   |...|:: .|.|     |.:..|......:.:....
 Frog    10 VKSNGTSQVKEVCVFENNTDQNSVFH---LDNIPQS-ALPR-----NSSQTDKTSLEQHPESEDV 65

  Fly   192 SNIGWGPKIVLPD-----PTVLRLECDFN---ARYRRSTGVCNNKQHPRTYGASMVPYRRMVSPD 248
            |:.|...:.||.:     |..|...|..|   .:||..||.|||:.:| .:||:.....|.:...
 Frog    66 SHTGSSFEAVLANLTGCVPQTLSPFCPNNCLAGKYRHITGACNNRNNP-AWGAANTLLARWLPAQ 129

  Fly   249 YADGIAAPR-----VSHHG-RLPPARQVSLK-IHRSS--YETDSNFTVMLAVFGQFMDHDITATS 304
            |.|||..|:     ..::| |||..|:|:.| ||.||  :..|..::.::..:||::||||..|.
 Frog   130 YEDGIGEPKGWREEFLYNGFRLPQVREVTNKIIHASSKAFREDDLYSHIIIEWGQYIDHDIAFTP 194

  Fly   305 LTTSQEGE--SIDCCVAATREQHPECYPVDILPDDPYYKQYNISCMNFVRSAPA-PTGRFG---- 362
            .:.|:...  |:||  .:|.|....|||:.:..:||..:.   .|:.|.||:.| .|||.|    
 Frog   195 QSVSKTPAIGSVDC--KSTCENLYPCYPIKLSEEDPLSQG---GCIPFYRSSSACGTGRGGLKFG 254

  Fly   363 ------PRMQLNQATAFIDASVVYGNLEQRQNQLRSFIN--GSLRMFV--TDDGRQLLPISS--- 414
                  ||.|:|..|:|||||.|||:.|..|::|::..:  |.||:.|  :|..|:.||..:   
 Frog   255 NPSLLNPREQINGLTSFIDASTVYGSSESLQHKLKNLSSEEGLLRVNVKYSDSSREYLPFETPSA 319

  Fly   415 ---NP-ADGCNRVQMTRLGKYCFESGDDRANENLLLTSMHLLWARHHNYLARQLQEQNPHWEDER 475
               :| ||...|:.       ||.:|:.||||.:.|.::|.||.|.||.:|:.|::.||||..|.
 Frog   320 CMQDPTADNAERID-------CFFAGEGRANEVITLAAVHTLWLREHNRIAKALKKLNPHWNSET 377

  Fly   476 LYQEARKILGAQMAHITYNEFLPVLLGK-----NISEAKGLLPAKHNLNAPDTYDPEVDPSIANC 535
            .|||||||:||....||:.:::|.:|||     .|...||             |:.:.:|||:|.
 Frog   378 TYQEARKIVGALHQIITFRDYMPKILGKAAYDQYIGLYKG-------------YNQKTNPSISNI 429

  Fly   536 FAAAAFRFAHTLLPGLFNISRDNS----TPE--AIELHKMLFNPFSLWAEHGID---HALMTAAN 591
            |..|||||.|..:|.:  :.|.||    .|:  ::.|:::.|.|:.:..|.|:|   ..|:..:.
 Frog   430 FTTAAFRFGHATIPPM--VHRLNSQYVDDPKYPSLPLNEVFFRPWRIVKEGGLDPLIRGLLGKSA 492

  Fly   592 TPVMQVDRFFSLEVTQKLFEGTAEDRVPLCGLDLVSLNIQRGRDHGIPSYPVFRRHCRLPTVDTW 656
            ....||| ..:.|:|:||...|...     .:||.|||:|||||||:|.|..:|..|.|..:.|.
 Frog   493 KLQTQVD-MINEELTEKLLVMTNNG-----SMDLASLNLQRGRDHGLPGYNDWREFCGLSRLATP 551

  Fly   657 EEMSQAI-DNATLDSIRQIYESPQDVDVYTGALSEPPLDGAIFGPLLSCMVSDQFLRLKLGDSHW 720
            .::..|: |...:..:..:|..|.::||:.|.|:|..|.||..|||.:|::..|...|:.||..|
 Frog   552 ADLINAVSDQKLVAKMIALYSHPDNIDVWLGGLAEDFLPGARTGPLFACLIGKQMQALREGDRFW 616

  Fly   721 YERKMGPQKFTKAQLAEIYKTSLAAIICRNSDGITRVREHVMQRLRDGGNP--HVDCQDLEGFHF 783
            ||..   ..|||.|.:|:.|.||:.:||.|: |::.|   .:.....|..|  .|.|..:.|  .
 Frog   617 YENN---NIFTKIQRSELEKHSLSRVICDNT-GLSHV---PLDAFLLGNYPDNFVSCDSIPG--I 672

  Fly   784 NFEPWSEKQQPQDLHSAGISR 804
            |.|.|  |:.|:...:.|..|
 Frog   673 NLEAW--KESPEKGTTCGSPR 691

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
cdNP_651081.1 An_peroxidase 218..762 CDD:460804 208/591 (35%)
tpoXP_031758614.1 thyroid_peroxidase 116..679 CDD:188657 208/606 (34%)
CCP 687..736 CDD:153056 2/5 (40%)
EGF_CA 738..781 CDD:214542
Blue background indicates that the domain is not in the aligned region.

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