DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17625 and Sash1

DIOPT Version :10

Sequence 1:NP_651078.1 Gene:CG17625 / 42678 FlyBaseID:FBgn0039002 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_038957407.1 Gene:Sash1 / 365037 RGDID:1566017 Length:1397 Species:Rattus norvegicus


Alignment Length:150 Identity:35/150 - (23%)
Similarity:62/150 - (41%) Gaps:34/150 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RAVRDWLVLLTMEKYIGKFLERGYDSIERCKLIIVSDLIMLGVDNPAHRKLLLEGVRFLVNAPEQ 68
            ::|.|.|..:.:::::..||..||:.::..||:...||..|.:.:|.||.:||..|         
  Rat   795 KSVEDLLDRINLKEHMPTFLFNGYEDLDTFKLLEEEDLDELNIRDPEHRAVLLTAV--------- 850

  Fly    69 FICKEPCELHEEIELKLD---PDVELFASLK-----------CLENVDFLETPVPYSLTSPQKTL 119
                   ||.:|.:...|   ...:|.|..:           |.|:.:.||.    ..|.....|
  Rat   851 -------ELLQEYDSNSDQSGSQEKLLADSQGLSGRSPRDSGCYESSENLEN----GKTQKPSAL 904

  Fly   120 TTRDSCKWNVKGVDQLPSDN 139
            :|:.|.:.|:|..::....|
  Rat   905 STKSSTESNLKSFNRSQPGN 924

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17625NP_651078.1 SAM_Samd5 2..64 CDD:188926 18/59 (31%)
Sash1XP_038957407.1 SLY 563..714 CDD:463602
SH3_SASH1 716..772 CDD:212900
SAM_SASH1_repeat1 793..857 CDD:188958 21/77 (27%)
PHA03247 <981..1208 CDD:223021
SAM_SASH1_repeat2 1323..1392 CDD:188891
Blue background indicates that the domain is not in the aligned region.

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