DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17625 and Sash3

DIOPT Version :10

Sequence 1:NP_651078.1 Gene:CG17625 / 42678 FlyBaseID:FBgn0039002 Length:142 Species:Drosophila melanogaster
Sequence 2:XP_006257592.1 Gene:Sash3 / 317578 RGDID:1560293 Length:381 Species:Rattus norvegicus


Alignment Length:122 Identity:24/122 - (19%)
Similarity:46/122 - (37%) Gaps:24/122 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RAVRDWLVLLTMEKYIGKFLERGYDSIERCKLIIVSDLIMLGVDNPAHRKLLLEGVRFLVNAPEQ 68
            :.:.:.|..:.:|::....|..||.::|..|.:..:.|..|.:.:|.||..||...         
  Rat   255 KTLHELLERIGLEEHTSTLLLNGYQTLEDFKELRETHLNELNIMDPQHRAKLLTAA--------- 310

  Fly    69 FICKEPCELHEEIELKLDPDVELFASLKCLENVDFLETPVPYSLTSPQKTLTTRDSC 125
                         ||.||.|..  .|.:..|..:..:.|..::::.|:..:.....|
  Rat   311 -------------ELLLDYDTA--GSEEAEEGAESSQEPALHTVSEPKVDIPRDSGC 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17625NP_651078.1 SAM_Samd5 2..64 CDD:188926 14/59 (24%)
Sash3XP_006257592.1 SLY 21..174 CDD:463602
SH3_SASH3 176..231 CDD:212901
SAM_superfamily 250..317 CDD:472832 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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