DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17625 and Ephb3

DIOPT Version :10

Sequence 1:NP_651078.1 Gene:CG17625 / 42678 FlyBaseID:FBgn0039002 Length:142 Species:Drosophila melanogaster
Sequence 2:NP_001401917.1 Gene:Ephb3 / 287989 RGDID:1305602 Length:993 Species:Rattus norvegicus


Alignment Length:55 Identity:16/55 - (29%)
Similarity:28/55 - (50%) Gaps:0/55 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VRDWLVLLTMEKYIGKFLERGYDSIERCKLIIVSDLIMLGVDNPAHRKLLLEGVR 60
            |.|||..:.|.:|...|:..|:.|.:....:...||:.:||....|:|.:|..::
  Rat   925 VGDWLDAIKMGRYKESFVGAGFASFDLVAQMTAEDLLRIGVTLAGHQKKILSSIQ 979

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17625NP_651078.1 SAM_Samd5 2..64 CDD:188926 16/55 (29%)
Ephb3NP_001401917.1 EphR_LBD_B3 31..203 CDD:198446
Ephrin_rec_like 264..308 CDD:429604
fn3 333..431 CDD:394996
FN3 <468..537 CDD:238020
EphA2_TM 555..625 CDD:464211
PTKc_EphR_B 623..891 CDD:173638
SAM_superfamily 917..985 CDD:472832 16/55 (29%)
Blue background indicates that the domain is not in the aligned region.

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