DRSC/TRiP Functional Genomics Resources

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Protein Alignment loco and SLC9A3R1

DIOPT Version :9

Sequence 1:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_004243.1 Gene:SLC9A3R1 / 9368 HGNCID:11075 Length:358 Species:Homo sapiens


Alignment Length:441 Identity:91/441 - (20%)
Similarity:146/441 - (33%) Gaps:168/441 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VRRGYNGFGFTISGQ-----QPCRLSCIISSSPAEQAGLRSGDFLISVNGLNVSKLPHETVVQLI 133
            :.:|.||:||.:.|:     |..||  :...||||:|||.:||.|:.|||.||.|..|:.||..|
Human    17 LEKGPNGYGFHLHGEKGKLGQYIRL--VEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRI 79

  Fly   134 GNSFGSIRMQIAENYYSDSSDEENAHATLRGQLLAASLRHKPRFLHHKAKLHRLRNSPQKKLNPP 198
            ..:..::|:.:.:    ..:||:.       |.|...:|.         :|.|.:.:| .:..||
Human    80 RAALNAVRLLVVD----PETDEQL-------QKLGVQVRE---------ELLRAQEAP-GQAEPP 123

  Fly   199 EAV---------EPHKS-KSSPDHPTLKPVLEDPPLTANLSKAADVANVSAMVRAVGSAALECRV 253
            .|.         ||.:: ||.|:...|:|                                    
Human   124 AAAEVQGAGNENEPREADKSHPEQRELRP------------------------------------ 152

  Fly   254 IVGYLGTIEMPKQISHSSKLQTVRSCIRK---------LRQEKRQPTIVLMCITPDSLSLQSSSG 309
                                   |.|..|         |..:|.:|...:..:.|||   .:.:.
Human   153 -----------------------RLCTMKKGPSGYGFNLHSDKSKPGQFIRSVDPDS---PAEAS 191

  Fly   310 GVLATYSSARLNFVSSSSESENRFFGLVTSAVHNTQIEEEYEPSAGSAAAAGH----ISISHSCH 370
            |:.|......:|.|.    .|.:..|.|.||:.                |.|.    :.:.....
Human   192 GLRAQDRIVEVNGVC----MEGKQHGDVVSAIR----------------AGGDETKLLVVDRETD 236

  Fly   371 VFVIDTKLIEHAQHLQ-------RAHEFRLQCTRDPISNLCLEFPNNSEYVVNLVRSMYTMRILP 428
            .|....::|...:||.       ...|.:.:.:|:.::...||.|.                  |
Human   237 EFFKKCRVIPSQEHLNGPLPVPFTNGEIQKENSREALAEAALESPR------------------P 283

  Fly   429 PASRSHQADYEAGAGAAAAGGAVAAAHSPQPSNHSEISTTTSNSDSGIGFN 479
            ...||..:|         ....:.:..|| |...|...::||:||..:.||
Human   284 ALVRSASSD---------TSEELNSQDSP-PKQDSTAPSSTSSSDPILDFN 324

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
locoNP_732773.1 PDZ_signaling 69..145 CDD:238492 30/75 (40%)
PTB_RGS12 251..391 CDD:269984 24/159 (15%)
RGS_R12-like 828..941 CDD:188661
RGS12_RBD 1073..1145 CDD:176412
RBD 1144..1213 CDD:128731
SLC9A3R1NP_004243.1 PDZ_signaling 12..91 CDD:238492 30/75 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 114..192 20/140 (14%)
PDZ_signaling 152..231 CDD:238492 21/160 (13%)
EBP50_C 235..358 CDD:312529 23/118 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..358 17/76 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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