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Protein Alignment loco and PDZD3
DIOPT Version :9
Sequence 1: | NP_732773.1 |
Gene: | loco / 42672 |
FlyBaseID: | FBgn0020278 |
Length: | 1541 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_011541302.1 |
Gene: | PDZD3 / 79849 |
HGNCID: | 19891 |
Length: | 571 |
Species: | Homo sapiens |
Alignment Length: | 130 |
Identity: | 35/130 - (26%) |
Similarity: | 53/130 - (40%) |
Gaps: | 21/130 - (16%) |
- Green bases have known domain annotations that are detailed below.
Fly 70 RTVEVRRGYNGFGFTIS-GQQPCRLSCIISSSPAEQAGLRSGDFLISVNGLNVSKLPHETVVQLI 133
|...:.:...||||::: |.|......:.:...||:||:..|..|:.|||::|.|..|..:.:.:
Human 222 RLCHIVKDEGGFGFSVTHGNQGPFWLVLSTGGAAERAGVPPGARLLEVNGVSVEKFTHNQLTRKL 286
Fly 134 GNSFGSIRMQIAENYYSDSSDEENAHATLRGQLLAASLRH------KPRFLHHKAKLHRLRNSPQ 192
..|...:.:.:| ..|........|..|||.|.. |||.|| |...||
Human 287 WQSGQQVTLLVA-------GPEVEEQCRQLGLPLAAPLAEGWALPTKPRCLH-------LEKGPQ 337
Fly 193 192
Human 338 337
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3528 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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