Sequence 1: | NP_732773.1 | Gene: | loco / 42672 | FlyBaseID: | FBgn0020278 | Length: | 1541 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038959013.1 | Gene: | Pdzd2 / 65034 | RGDID: | 619958 | Length: | 2818 | Species: | Rattus norvegicus |
Alignment Length: | 1961 | Identity: | 365/1961 - (18%) |
---|---|---|---|
Similarity: | 589/1961 - (30%) | Gaps: | 703/1961 - (35%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 TAVGTGAAAAEDASPA--ANSGPAPISTSTTPSGSNSQQHQRRRKKRANYNYNGIRTV------- 72
Fly 73 EVRRGYNGFGFTISGQQPCRLSC--------IISSSPAEQAGLRS----GDFLISVNGLNV---- 121
Fly 122 --------SKLPHETVVQLIGN------SFGSIRMQIAENYYSDSSDEENAHATLRGQLLAASLR 172
Fly 173 HKPR----------FLH--------------------------------------HKAK------ 183
Fly 184 ---------LHR---------LRNSPQKKLNP---PEAVEPHKSKSSPDHPTL------------ 215
Fly 216 -----KPVLED---PPLTANLSKAADV-----------ANVSAMVRAVGSAA-LECRVIVGYLGT 260
Fly 261 I----------EMPKQISHSSKLQTVRSCIRKLRQEKRQPTIVLMCITPDSLSLQSSSGGVLATY 315
Fly 316 SSARLNFVSSSSESENRFFGLVTSAVHNTQIEEEYEPSAGSAAAAGHISISHSCHVFVIDTKLIE 380
Fly 381 HAQHLQRAHEFRLQCT--RDPIS--------------NLCLEFPNNSEYVVNLVRSMYTMRILPP 429
Fly 430 ASRSHQ---ADYEAGAGAA-------AAGGAVAAAHSPQPSNHSEISTTTSNSDSGIGFNNDCTN 484
Fly 485 ISDRILVVDFLAAGAGAAAAAHAGPPTYPAPARPLGIVGIPDNRLTVRAMPDHSALLRSPPASSS 549
Fly 550 LRRPNLLA-----SFNLIQSPATNLTSTRSCDDVLNLFVDDSPRTLAAVASM--DDISLHSAAPS 607
Fly 608 LDEGHTFAHPACVPRKMRRSLALE-TPTTPHKLSAQVFGQPGSRHSLGFEAIDSVQSSVSGACMD 671
Fly 672 QTMDTWASLQNLHKSHKDRTSMSASSSSHCLLEATNSEPDLGNRALPANASPFRRAWGQSSFRTP 736
Fly 737 RSDKVAKEQQQLGQSSPVRRTASMNAS-------DNDMYIKTLMLDSDLKSSRSQHQLSL-LQVP 793
Fly 794 KVLTTPAPPS----AITASVAAEGAAQDHGCPSSWAGSFERMLQDAAGMQTFSEFLKKEFSAENI 854
Fly 855 YFWTACERYRLLESEADRVAQAREIFAKHLANNSSD-----PVNVDSQARSLTEEKLADAAP--- 911
Fly 912 --------DI-----FAPA--------QKQIFSLMKFDSYQRFIRSDLYKSCVEAEQKNQPLPYS 955
Fly 956 GLDLDELLKTNFHLGAFSKLKKSASNAEDRRRKSLLPWHRKTRSKSRDRTEIMADMQHALMPAPP 1020
Fly 1021 VPQNAPLTSASLKLVC-------------GQNSLSDLH-----------------SSRSSLSSFD 1055
Fly 1056 A--GTATGGQGASTESVYSLCRVILTDGA-TTIVQT---------------------------RP 1090
Fly 1091 GETVGELVE-------RLLEKRNLVYPYYDIVF--QGS----TKSIDVQQPSQILAGKEVVIERR 1142
Fly 1143 VAFKL-------DLPDPKVISVKSKPKK-------------QLHEVIRPILSK-------YNYKM 1180
Fly 1181 EQVQVIMRDTQVPIDLNQPVTMADGQRLRIVMVNSDFQVGGGSSMPP-----------KQSKPMK 1234
Fly 1235 PLPQGHLDELTNKVFNELLASKADAAASEKSRPVDLC----SMKSNEAPSETSSL---------- 1285
Fly 1286 -----FERMRRQQRDGGNIPASKLPKLKKKSTSSSQQSEEAATTQAVADPKKPIIAKLKAGVKLQ 1345
Fly 1346 VTERVAEHQDELLEGLKRAQLARLEDQRGTEINFDLPDFLKNKENLSAAVSKLRKVRASLS-PVS 1409
Fly 1410 KVP------ATPTEIPQPAPRLSITRSQ----------QPVSPMKVDQEPETDLPA--------- 1449
Fly 1450 ---ATQDQTEFAKAP-------------------PP----LPPKPKVL----------PIKPSN- 1477
Fly 1478 WGVAQ---PTGNYCNKYSPSKQVPTSP--KEASKP-------GTFASKIPLDLGRKSLEEAGSRC 1530
Fly 1531 AYLDEPSSSFV 1541 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
loco | NP_732773.1 | PDZ_signaling | 69..145 | CDD:238492 | 27/112 (24%) |
PTB_RGS12 | 251..391 | CDD:269984 | 28/149 (19%) | ||
RGS_R12-like | 828..941 | CDD:188661 | 28/141 (20%) | ||
RGS12_RBD | 1073..1145 | CDD:176412 | 17/112 (15%) | ||
RBD | 1144..1213 | CDD:128731 | 15/95 (16%) | ||
Pdzd2 | XP_038959013.1 | PDZ_signaling | 335..416 | CDD:238492 | |
PDZ_signaling | 590..671 | CDD:238492 | |||
PDZ_signaling | 729..813 | CDD:238492 | 23/91 (25%) | ||
PHA03247 | <985..1446 | CDD:223021 | 103/584 (18%) | ||
PDZ_signaling | 2603..2677 | CDD:238492 | |||
PDZ_signaling | 2731..2813 | CDD:238492 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG3528 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |