DRSC/TRiP Functional Genomics Resources

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Protein Alignment loco and RGS2

DIOPT Version :10

Sequence 1:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_002914.1 Gene:RGS2 / 5997 HGNCID:9998 Length:211 Species:Homo sapiens


Alignment Length:129 Identity:42/129 - (32%)
Similarity:74/129 - (57%) Gaps:1/129 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   824 WAGSFERMLQDAAGMQTFSEFLKKEFSAENIYFWTACERYRLLESEADRVAQAREIFAKHLANNS 888
            |:.:|:.:|....|:..|..|||.||..|||.||.|||.::..:|.....::||:|:...:...:
Human    80 WSEAFDELLASKYGLAAFRAFLKSEFCEENIEFWLACEDFKKTKSPQKLSSKARKIYTDFIEKEA 144

  Fly   889 SDPVNVDSQARSLTEEKLADAAPDIFAPAQKQIFSLMKFDSYQRFIRSDLYKS-CVEAEQKNQP 951
            ...:|:|.|.::|..:.:.:|....|..|||:::|||:.:||.||:.|:.|:. |.:.:...:|
Human   145 PKEINIDFQTKTLIAQNIQEATSGCFTTAQKRVYSLMENNSYPRFLESEFYQDLCKKPQITTEP 208

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
locoNP_732773.1 PDZ_RGS12-like 70..145 CDD:467194
PTB_RGS12 251..391 CDD:269984
RGS_R12-like 828..941 CDD:188661 39/112 (35%)
RBD1_RGS12_like 1072..1141 CDD:340515
RBD2_RGS12_like 1142..1212 CDD:340587
GoLoco 1354..1375 CDD:214645
RGS2NP_002914.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..33
Necessary for membrane association. /evidence=ECO:0000269|PubMed:11278586 32..66
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..68
Necessary to inhibit protein synthesis. /evidence=ECO:0000269|PubMed:19736320 79..116 15/35 (43%)
RGS_RGS2 84..197 CDD:188664 39/112 (35%)
Blue background indicates that the domain is not in the aligned region.

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