Protein Alignment loco and pdzd3a

DIOPT Version :9

• Sequence 1: NP_732773.1
• Gene: loco / 42672
• FlyBaseID: FBgn0020278
• Length: 1541
• Species: Drosophila melanogaster
• Sequence 2: XP_685398.3
• Gene: pdzd3a / 557269
• ZFINID: ZDB-GENE-080430-1
• Length: 520
• Species: Danio rerio
• Alignment Length: 465
• Identity: 92/465 - (19%)
• Similarity: 155/465 - (33%)
• Gaps: 130/465 - (27%)

  Fly    80 GFGFTIS---GQQPCRLSCIISSSP---AEQAGLRSGDFLISVNGLNVSKLPHETVVQLIGNSFG 138
            ||||.:|   |:  ||...:....|   ||:||||.||.::.||...|....|.|||
Zfish    73 GFGFYLSRDAGR--CRGHVVRQVEPWSSAERAGLRIGDHVLEVNEDFVDDKEHSTVV-------- 127

  Fly   139 SIRMQIA--ENYYSDSSDEENAHATLRGQ-LLAASLRHKPRFLHHKAKLHRLRNSPQKKLN---- 196
             :::|.:  :.|....|.::...|...|: ||:.:..::|... .:.:|..:...|...|.
Zfish   128 -LKVQASGLKLYLLVLSAQDYEFAVSEGRDLLSVARSYRPEGC-SRPRLCHITKEPGCGLGLSII 190

  Fly   197 PPEAVEPHKSKSSPDHPTLKPVLEDPPLTANLSKAADVANVSAMVRAVGSAALECRVIVGYLGTI 261
            |.|...        ....|.||.:.|      ::.|.:.|...::...|.:.    .::.|....
Zfish   191 PIEGAR--------GRYRLNPVTDGP------AERAGIQNGDRLIWINGVSI----SVISYAALA 237

  Fly   262 EMPKQISHSSKLQTVRSCIRKLRQEKRQPTIVLMCIT------PDSLSL-QSSSG-GVLATYSSA 318
            :|.|:......:..:.|...::......|.|.....|      |.:|.| |...| |.|......
Zfish   238 KMVKKCEKHLTVLVIDSRSEEIYNRMGLPIIPAFAETHNLPYRPKTLHLTQGPQGYGFLLRQEKL 302

  Fly   319 RLNFVS---------SSSESENRFFGLVTSAVHNTQIEE-EYEPSAGSAAAAGH------ISIS- 366
            |...::         |.:|:.....|.:..||:..|:|: |:|........:|.      |||:
Zfish   303 RSGRIAHILREIDPCSPAETAGMEDGEIVLAVNGEQVEDAEHEGIVSKIRQSGQQVTLTTISIAG 367

  Fly   367 HSCHVFVIDTKLIEHAQHLQRAHEFRLQCTRDPISNLCLEFPNNSEYVVNLVRSMYTMRILPPAS 431
            ...:..:..:.|:.:.:|:.:.         :|.:...||.|
Zfish   368 RDFYTQLAMSPLLFYDEHIPKC---------EPFATPALEHP----------------------- 400

  Fly   432 RSHQADYEAGAGAAAAGGAVAAAHSPQP---SNHSEISTTTSNSDSGIGFNNDCTNISDRILVVD 493
            ..||                   :.|||   ..|.|        .:|.|||..|........:..
Zfish   401 EGHQ-------------------NPPQPRLCELHKE--------GTGFGFNLGCVENKPGTYIGQ 438

  Fly   494 FLAAGAGAAA 503
            .::...|..|
Zfish   439 VVSGSTGERA 448

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
loco	NP_732773.1	PDZ_signaling	69..145	CDD:238492	25/70 (36%)
		PTB_RGS12	251..391	CDD:269984	30/164 (18%)
		RGS_R12-like	828..941	CDD:188661
		RGS12_RBD	1073..1145	CDD:176412
		RBD	1144..1213	CDD:128731
pdzd3a	XP_685398.3	PDZ_signaling	61..142	CDD:238492	26/79 (33%)
		PDZ_signaling	172..252	CDD:238492	15/97 (15%)
		PDZ	280..363	CDD:214570	18/82 (22%)
		PDZ	408..490	CDD:214570	11/49 (22%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG3528
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	1	0.900