DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loco and Zasp67

DIOPT Version :9

Sequence 1:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_648358.2 Gene:Zasp67 / 39148 FlyBaseID:FBgn0036044 Length:730 Species:Drosophila melanogaster


Alignment Length:556 Identity:107/556 - (19%)
Similarity:193/556 - (34%) Gaps:165/556 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   967 FHLG--------AFSKLKKSASNAEDRRRKSLLPWHRKTRSKSRDRTEIMADMQHALMPAP---- 1019
            |:.|        |:..|||..: :|....||.:|....:.:.|..:   :.:..:|..|.|    
  Fly    78 FYFGVYRENEEDAYECLKKFPT-SEGSLTKSPMPTISPSPTPSLSQ---LTETTNARTPEPEPFV 138

  Fly  1020 PVPQN-------APLTSASLKLV--CGQNSLSDLHS--SRSSLSSFDA-GTATGGQGASTESVYS 1072
            |:|:.       ||.....:.::  |.| .:|::||  .|..::..|| |.|..| |...|::| 
  Fly   139 PLPRELAAATMAAPAVEVDVDVLAECRQ-PMSEVHSEEKRGDVNGHDAPGQADEG-GLPVENLY- 200

  Fly  1073 LCRVILTDGATTIVQTRPGETVGELVE-RLLEKRNLVYPYYDIVFQGSTKSIDVQQPSQILAGKE 1136
                 |.|     :..||...:.|..| :|:|                      ::.:.:|:|:.
  Fly   201 -----LPD-----LPDRPCSALSERQEIKLVE----------------------EEIAAVLSGES 233

  Fly  1137 VVIERR----VAFKLDLPDPKVISVKSKPKKQLHEVIRPILSKYNYKMEQVQVIMRDTQVPIDLN 1197
            .|::..    |.|....|.|.|.......:....||.:..|.|.....:....:.|.       |
  Fly   234 EVLKEHNVLGVNFYRIFPKPGVCMSSDVLRSLNEEVTKTKLEKDKENRQWSTFLQRP-------N 291

  Fly  1198 QPVTMA----DGQR-----LRIVMVNSDFQVGGGSSMPPKQSKPM---KPLPQGHLDELT----- 1245
            :||..:    :.:|     .::.:|.|          .|::..||   ||.|:    |.|     
  Fly   292 RPVPKSKQSLEAERRAANAYKVTIVKS----------APREKSPMPEAKPAPK----EATPPKEV 342

  Fly  1246 -----NKVFNELLASKADAAASEKSRPVD-----LCSMKSNEAPSETSSLFERMR---------- 1290
                 ..|..|::..:.:....|:..|.|     |..:...|.|.|.....:..:          
  Fly   343 EKKEEEPVPEEVVEPEPEPEKDEEPLPTDSEVPNLEQLPETELPDEQPEKSDAPKEVCEPEVVIQ 407

  Fly  1291 --------RQQRDGGNIPASKLPKLKKKSTSSSQQSEEAATTQAVADPKKPIIAKLKAGVKLQVT 1347
                    .:..||   ||...|..:..:....:..||.|..:.:||.::.:.|.......:|.|
  Fly   408 TEPGSPDGNEASDG---PAGATPPAEPITPVPVKSEEELALERQLADVQRQLAALSSLPSTIQST 469

  Fly  1348 -ERVAEHQDELLEGLK----RAQLARLEDQRGTEINFDLPDFLKNKENLSAAVSKLRKVRASLSP 1407
             :.|.:...:||..:|    ..||.::::..|.|...:        |.::.|.:.:.        
  Fly   470 LDAVTKQLADLLPTIKLQQQEKQLPQIDENSGNEEQVE--------EGVTTATNTIN-------- 518

  Fly  1408 VSKVPATPTEIPQPAPRLSITRSQQ-PVSPMKVDQE 1442
                  |..|.......:||:.|.. ||.|.:.:::
  Fly   519 ------TAGETEDAGKDISISGSDNPPVGPCESNED 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
locoNP_732773.1 PDZ_signaling 69..145 CDD:238492
PTB_RGS12 251..391 CDD:269984
RGS_R12-like 828..941 CDD:188661
RGS12_RBD 1073..1145 CDD:176412 12/76 (16%)
RBD 1144..1213 CDD:128731 13/77 (17%)
Zasp67NP_648358.2 PDZ_signaling 2..75 CDD:238492
DUF4749 653..>699 CDD:292558
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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