DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment loco and Dlg5

DIOPT Version :9

Sequence 1:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_609505.1 Gene:Dlg5 / 34573 FlyBaseID:FBgn0032363 Length:1916 Species:Drosophila melanogaster


Alignment Length:939 Identity:192/939 - (20%)
Similarity:310/939 - (33%) Gaps:292/939 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   737 RSDKVAKEQQQLGQSSPVRRTASMNASDNDMYIKTLMLDSDLKSSRSQHQLSLLQVPKVLTTPAP 801
            |.|::|.|.....:.....|....:..:.....|.|:|::..:.|: |.|....|||.|      
  Fly   100 RCDELATELTLYQEHYVADRNKFTDMVEESARFKRLLLETQNQQSQ-QAQNGNSQVPPV------ 157

  Fly   802 PSAITASVAAEGAAQDH------GCPSSWAGSFERMLQDAAGMQTFSEFLKKEF----------- 849
                       |:...:      ||..|.:.....:.::...:....|..||.:           
  Fly   158 -----------GSGNPYYFGKTQGCDGSCSEKLAELKKERNMVAVEREKYKKSYIELEKDRNYYR 211

  Fly   850 -------------SAENIYFWTACERYRLLESEADRVAQAREIFAKH--LANNSSDPVNVDSQAR 899
                         |.|:....:..|....|.||.|.|.|..:..:..  |||...:.:..|.|  
  Fly   212 ERGDENQKLKVLLSQESKNVLSLTEELNQLLSEKDNVLQEHQKMSDDLVLANKEIERLKKDEQ-- 274

  Fly   900 SLTEEKLADAAPDIFAPAQKQIFSLMKFDSYQRFIRSDLYKSCVEAEQKNQPLPYSGLDLD---E 961
                          .|.|:.::..|...|..:|    ||.||...:..|..|   ||.:|:   |
  Fly   275 --------------LARAEIKVLQLANADLKKR----DLLKSRDSSWSKEFP---SGKELENSKE 318

  Fly   962 LLKTNFHL-GAFSKLKKSASNAEDRRRKSLLPWHRKTRSK---SRDRTEIMAD-MQH-------- 1013
            |.|....| .|.|::::|:.:||:.:|  :..|....|.|   .||..:.:.| |:|        
  Fly   319 LEKLRKSLEKALSEVERSSQDAEEAKR--VRDWAISQREKIVQERDSVKTLCDKMRHERDKAISD 381

  Fly  1014 ---ALMPAPPVPQNAPLTSASLKLVCGQNSLSDLHSSRSSLSSFDAGTATGGQGASTESVYSLCR 1075
               |:..:..:.:........:.|:..|..    ...|.:|.|    .|:|.:.:...|.|    
  Fly   382 SLMAIRDSEKIKKQKDEAQKKIDLLKEQME----QQERQNLDS----NASGSRRSFRPSSY---- 434

  Fly  1076 VILTDGATTIVQTRPGETVGELVERLLEKRNLVYPY---YDIVFQGSTKSIDVQQPSQILAGKEV 1137
                :|                 |.|||.....|.:   ..|:...|.|       .:::.|  |
  Fly   435 ----EG-----------------EDLLEVELSGYEHTSDLGIILDDSNK-------RKLVCG--V 469

  Fly  1138 VIERRVAFKLDLPDP--KV--ISVKSKPKKQLHEVIRP-------ILSKYNYKME---QVQVIMR 1188
            ........||.:.|.  ||  :..:|..|:.:.:.||.       ::|:..:...   .||:..|
  Fly   470 TSSSPACGKLKINDVICKVNNLDCQSLSKRMVLDEIRACAPRSLLLVSRTRHSKRHAYSVQLKTR 534

  Fly  1189 DTQVP--IDLNQPVTMADGQRLRIVMVNSDFQVGGGSSMPPKQSKPMKPLPQGHLDELTNKVFNE 1251
            |...|  :.|:..|.:|..::..:.....:..||                               
  Fly   535 DRDCPHGLQLDMGVFIAKIEQNSLAFYEPELDVG------------------------------- 568

  Fly  1252 LLASKADAAASEKSRPVDLCSMKSNEAPSETSSLFERMRRQQRDGGNIPASKL--PKLKKKSTSS 1314
                  |...|..::.:|  |::|.|      .:.:.|...:.||.|:.|.|.  .:|....|:|
  Fly   569 ------DRVLSINNKSMD--SVQSIE------EVMQLMNDPRSDGLNLFALKYVQDQLPPGMTTS 619

  Fly  1315 SQQSEEAATTQAVAD------------PKKP------IIAKL---KAGVKLQVTERVAEHQDELL 1358
            |.|::...:.|.|:.            .|.|      ...||   |.|......|:  ||.|.: 
  Fly   620 SAQTDSIDSMQHVSSAGGGGGSGPSSATKHPSRFAEFFFRKLKFSKPGTPEDNFEQ--EHDDAI- 681

  Fly  1359 EGLKRAQLARLEDQRGTEINFDLPDFLKNKENLSAAVSKLRKVRASLSPVSKVPAT------PTE 1417
                 |.|..:..:..:|         |:||||.....:.:|.:.:...:...|.|      ||.
  Fly   682 -----AALDSVLSENSSE---------KSKENLFNRKKRTKKEKEASKSMGTWPRTNISHENPTG 732

  Fly  1418 IPQPAPRLSITRSQQPVSPMKVDQE---------PETDLPAATQDQTEFAKAPPPLPP---KPKV 1470
            ..:...:.....|.....|:.||::         ||....|..|||     .||||||   || :
  Fly   733 TMRGNEKKRALMSLFTAGPINVDKDDELMGEVGVPEKQPAALIQDQ-----LPPPLPPQMSKP-L 791

  Fly  1471 LPIKPSNWGV--AQPTGNYCNKYS---------------PSKQVPTSPKEASKPGTFASKI---- 1514
            ..|:.||.|.  ..|..| .|..|               |:...||.|:. |..|..|.:|    
  Fly   792 AHIRGSNGGAIKTHPNRN-SNPVSSGVSALFPPGPPNGMPNTSYPTHPRH-SLYGVTAEEINQKP 854

  Fly  1515 ----PLDLGRKSLEEAGSRCAYLDEPSSS 1539
                || :|..:..:..|:..|...|.|:
  Fly   855 IQRAPL-MGANARVKMPSQERYGTRPHSN 882

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
locoNP_732773.1 PDZ_signaling 69..145 CDD:238492
PTB_RGS12 251..391 CDD:269984
RGS_R12-like 828..941 CDD:188661 24/138 (17%)
RGS12_RBD 1073..1145 CDD:176412 11/74 (15%)
RBD 1144..1213 CDD:128731 18/84 (21%)
Dlg5NP_609505.1 AAA_23 <165..333 CDD:290211 40/190 (21%)
CENP-F_leu_zip 229..360 CDD:287450 39/155 (25%)
DUF1090 <326..408 CDD:284007 17/83 (20%)
PDZ_signaling 439..516 CDD:238492 18/85 (21%)
PDZ_signaling 533..592 CDD:238492 14/103 (14%)
PDZ_signaling 1290..1369 CDD:238492
PDZ_signaling 1497..1576 CDD:238492
SH3_DLG5 1594..1657 CDD:212794
Guanylate_kin 1737..1904 CDD:279019
NK <1773..1905 CDD:302627
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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