DRSC/TRiP Functional Genomics Resources

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Protein Alignment loco and slc9a3r1a

DIOPT Version :9

Sequence 1:NP_732773.1 Gene:loco / 42672 FlyBaseID:FBgn0020278 Length:1541 Species:Drosophila melanogaster
Sequence 2:NP_997872.2 Gene:slc9a3r1a / 327272 ZFINID:ZDB-GENE-031006-7 Length:384 Species:Danio rerio


Alignment Length:442 Identity:89/442 - (20%)
Similarity:150/442 - (33%) Gaps:121/442 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 VRRGYNGFGFTISGQ--QPCR-LSCIISSSPAEQAGLRSGDFLISVNGLNVSKLPHETVVQLIGN 135
            :.:|..|:||.:.|:  :|.: :..:...|||..|||.:||.|..|||.||....|:.||..|.:
Zfish    12 LEKGDTGYGFHLHGEKNKPGQFIRHVEPDSPAAAAGLLAGDKLALVNGENVEDEKHQQVVSRIRD 76

  Fly   136 SFGSIRMQIAENYYSDSSDEENAHATLRGQLLAASLRHKPRFLHHKAKLHRLRNSPQKKLNPPEA 200
            :.|.:.:.:.        :.|.|...|:                                     
Zfish    77 TVGKLELVVL--------NAETAELLLK------------------------------------- 96

  Fly   201 VEPHKSKSSPDHPTLKPVLEDPPLTANLSKAADVANVSAMVRAVGSAALECRVIVGYLGTIEMPK 265
               |..|...::     |.:..|:.|......:|.|        |:::.|...:....|.:.:.:
Zfish    97 ---HNLKCQKEY-----VTDGIPIPAGSEPEDEVKN--------GTSSRESTPVPETNGDMRIDR 145

  Fly   266 QISHSSK-----LQTVRSC-IRK--------LRQEKRQPTIVLMCITPDSLSLQSSSGGVLATYS 316
             :|.|||     |:. |.| |:|        |..||.:|...:..:..||   .:...|:.....
Zfish   146 -LSVSSKDSKNELRP-RLCHIKKGATGYGFNLHTEKTKPGQYIRAVDEDS---PAEKSGLRPQDK 205

  Fly   317 SARLNFVSSSSESENRFFGLVTSAVHNTQIEEEYEPSAGSAAAAGHISISHSCHVFVIDTKLIEH 381
            ..::|.:|                ||..|..|..............:.:......|.:..:::..
Zfish   206 IVQVNGIS----------------VHTMQHSEVVAAIKAGGDETKLLVVDPEADAFFMSCEILPT 254

  Fly   382 AQHL----------QRAHEFRLQCTRDPISNLCLEFPNNSEYVVNLVRSMYTMRILPPASRSHQA 436
            .:||          :.|.|   |.....:..   |.|.....:.:...|..|.....||..|..|
Zfish   255 EEHLTGPLPEPIPRREAEE---QVNGKVVQE---EKPKVEMSLSSSSTSSNTSTSAAPAPASAPA 313

  Fly   437 DYEAGAGAAAAGGAVAAAHSPQPSNHSEISTTTSNSDSGIGFNNDCTNISDR 488
            ...|.|.|:|...|:|||  ||    .::....|::|:|:..|.......:|
Zfish   314 PASAPAPASAPAPAMAAA--PQ----EKVKEKASSADAGLALNMSLQQAKER 359

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
locoNP_732773.1 PDZ_signaling 69..145 CDD:238492 25/73 (34%)
PTB_RGS12 251..391 CDD:269984 27/163 (17%)
RGS_R12-like 828..941 CDD:188661
RGS12_RBD 1073..1145 CDD:176412
RBD 1144..1213 CDD:128731
slc9a3r1aNP_997872.2 PDZ_signaling 7..86 CDD:238492 25/73 (34%)
PDZ_signaling 159..238 CDD:238492 17/98 (17%)
EBP50_C 242..384 CDD:312529 29/130 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3528
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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