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Protein Alignment loco and Rgs18
DIOPT Version :9
Sequence 1: | NP_732773.1 |
Gene: | loco / 42672 |
FlyBaseID: | FBgn0020278 |
Length: | 1541 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001040549.1 |
Gene: | Rgs18 / 289076 |
RGDID: | 1306522 |
Length: | 235 |
Species: | Rattus norvegicus |
Alignment Length: | 176 |
Identity: | 55/176 - (31%) |
Similarity: | 96/176 - (54%) |
Gaps: | 12/176 - (6%) |
- Green bases have known domain annotations that are detailed below.
Fly 774 LDSDLKSSRSQHQLS-LLQVPKVL-TTPAPPSAITAS---VAAEGAAQDHGCPSSWAGSFERMLQ 833
:::.:::...:::|| |||.|... .|....||:.|. |::|.|.: ||.||:::|.
Rat 35 IEAKIRAKEKRNRLSLLLQRPDFHGETHTSRSALLAKETRVSSEEALK-------WAESFDKLLS 92
Fly 834 DAAGMQTFSEFLKKEFSAENIYFWTACERYRLLESEADRVAQAREIFAKHLANNSSDPVNVDSQA 898
...|:..|:.|||.|||.|||.||.|||.::........:.:|:.|:.|.:.|::...||:|...
Rat 93 HRDGVDAFTRFLKTEFSEENIEFWVACEDFKKCTEPQQLILKAKSIYEKFIKNDAPKEVNLDFHT 157
Fly 899 RSLTEEKLADAAPDIFAPAQKQIFSLMKFDSYQRFIRSDLYKSCVE 944
:.:..:.:|......|..||.::..||:.|||:||::|::|...:|
Rat 158 KEVITKSIAQPTLHSFDAAQSRVCQLMEHDSYKRFLKSEIYLHLIE 203
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_KOG3589 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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