DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRpL45 and mrpl-45

DIOPT Version :9

Sequence 1:NP_651072.1 Gene:mRpL45 / 42671 FlyBaseID:FBgn0263863 Length:361 Species:Drosophila melanogaster
Sequence 2:NP_497347.3 Gene:mrpl-45 / 191044 WormBaseID:WBGene00022493 Length:357 Species:Caenorhabditis elegans


Alignment Length:297 Identity:108/297 - (36%)
Similarity:166/297 - (55%) Gaps:13/297 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FKRLRKLKFVKMDLP--NLREKQEDITKEEMRSRMKERGVLP-----PRPWMERPFHISCTGGIF 116
            |:|:|..|.:.::||  :.|||:.:::..|||:.:.:||:.|     ||.|.|.........||.
 Worm    58 FRRMRGRKTLLIELPEDSAREKEAEMSPGEMRTELLKRGINPYKEAQPRVWNEAQVTFQSIYGIA 122

  Fly   117 EAYVPPEGDGKKSIISTSGAKQKLEFLEKKSKSLMAVRKIRSYD--ENFSSDDFGAEAQDIYIQA 179
            :.|||||..|..:.::....:.|.....|.....|...:||...  |.|....|.|:|:|||:||
 Worm   123 DPYVPPENPGSFTDVNNKFDEVKQRIQHKFYNWRMGTNRIRKKQGFEKFDIKTFCAKAEDIYVQA 187

  Fly   180 HTHMAAKDKYKIREFVSERCYPEMMHNVKDKTIRWKFLQSLEPPRVVHARVTEVITKE-NQFAQV 243
            |..:..:||..:.::::|..:.:|..:|::.::|::.:..|||.|||..|..:...|. |..||:
 Worm   188 HRALEQRDKTAMYKYITEYAFAKMWPDVENGSVRFELISVLEPSRVVAVRCFDNPPKSGNDIAQI 252

  Fly   244 TVRFHSQQMLAIYDRFGRLMHGSEIITKDVLEYVVFEKHISNEYGKWRLHDKIIPDWLPAKQPAP 308
            |||.|::|.||:|||||.|:.|||...|||:||||||.||:...|:||||.||.|.|:.|||...
 Worm   253 TVRMHTRQKLAVYDRFGGLLLGSEDEEKDVVEYVVFENHIAVVDGEWRLHGKIYPKWIDAKQGMV 317

  Fly   309 ITYRLIEDAEEPPKELSAGDA-EVKQVDSVGEQSKEQ 344
            .|..|  .||:..|:.:...| .::..:.:.|..||:
 Worm   318 GTQML--SAEQVEKQHAEAKALPLRTTEKLEEAKKEK 352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRpL45NP_651072.1 Tim44 152..297 CDD:282178 63/147 (43%)
mrpl-45NP_497347.3 Tim44 156..304 CDD:214950 63/147 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156848
Domainoid 1 1.000 120 1.000 Domainoid score I3582
eggNOG 1 0.900 - - E1_KOG4599
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 175 1.000 Inparanoid score I2707
Isobase 1 0.950 - 0 Normalized mean entropy S4578
OMA 1 1.010 - - QHG29206
OrthoDB 1 1.010 - - D1121890at2759
OrthoFinder 1 1.000 - - FOG0005541
OrthoInspector 1 1.000 - - oto17689
orthoMCL 1 0.900 - - OOG6_104462
Panther 1 1.100 - - LDO PTHR28554
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2761
SonicParanoid 1 1.000 - - X4497
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.750

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