DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and MEF1

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_013170.1 Gene:MEF1 / 850758 SGDID:S000004059 Length:761 Species:Saccharomyces cerevisiae


Alignment Length:714 Identity:218/714 - (30%)
Similarity:366/714 - (51%) Gaps:73/714 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTV---TDYLTQERERGITICSSAVT 92
            :|:|||||.||||:||||.|||:|:|..:.:|:.||...:.|   .|.:..|||:||||.|:|..
Yeast    68 NKLRNIGISAHIDSGKTTFTERVLYYTKRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATY 132

  Fly    93 FSWN----DHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPR 153
            .||:    ::..||:|||||||||:|||::|..:||.|:|:...:||::|||||..|..::.:||
Yeast   133 CSWDKEGKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPR 197

  Fly   154 LIFVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAINDVITLERLSWQQKDLGRSY 218
            :.|:|||||..:|..:.:..|..||:.....:|.|:.:|..:..:.|:|....: :.:.|.|...
Yeast   198 VTFINKMDRMGSDPFRAIEQLNSKLKIPAAAVQIPIGSESSLSGVVDLINRVAI-YNKGDNGEII 261

  Fly   219 RNVKLEPSDDLRLLQEKRNELIDQLSGLDDELADVVISTESFDNVDNALIERALRRATTQQKVVP 283
            ....: |.:...|::|||..||:.|:.:|||:|::.:..:   ......|:.|:||:|..:...|
Yeast   262 EKGPV-PENLKPLMEEKRQLLIETLADVDDEMAEMFLEEK---EPTTQQIKDAIRRSTIARSFTP 322

  Fly   284 VLLGSAYKNVGIQRLMDAVNAYLPAPEE-RNQIYDCFGTEV------------AGKVFKIVHDKQ 335
            ||:|||..|.|||.::||:..|||.|.| .|...|....|.            .|..||:...|.
Yeast   323 VLMGSALANTGIQPVLDAIVDYLPNPSEVLNTALDVSNNEAKVNLVPAVQQPFVGLAFKLEEGKY 387

  Fly   336 RGPLTLVRILRGEIKRGMRLISAR-GQAEVVSKLYEPLADEYREVSAVQSGDVVICAGLKSTVTG 399
             |.||.||:.:|.:::|..:.:.: |:...|::|....:.|..:|..|.||::....|: ...:|
Yeast   388 -GQLTYVRVYQGRLRKGNYITNVKTGKKVKVARLVRMHSSEMEDVDEVGSGEICATFGI-DCASG 450

  Fly   400 DLLTSSQSALKNAQKRYKQSLGNTAAKVEEDDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQT 464
            |..|       :...:|..|                       ...:||||...||.|.|..:..
Yeast   451 DTFT-------DGSVQYSMS-----------------------SMYVPDAVVSLSITPNSKDASN 485

  Fly   465 AMEQALKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAYKETI 529
             ..:||.:.|:|||:.||.:|..:.:|::.||||||::|...|:..||.:|...|..|::|:|:|
Yeast   486 -FSKALNRFQKEDPTFRVKFDPESKETIISGMGELHLEIYVERMRREYNVDCVTGKPQVSYRESI 549

  Fly   530 EAPALTTLSVEKEIAGSKQ--SVSITLEVVKN--QAELFSLDKSPDNLPNLNTLRPRILQVLRKG 590
            ..||....:.:|:..|:.|  .|..||..|.:  :..:|........:|:      :.|....||
Yeast   550 TIPADFDYTHKKQSGGAGQYGRVIGTLSPVDDITKGNIFETAIVGGRIPD------KYLAACGKG 608

  Fly   591 SISALERGPRVGGQVVETQIRLHNATIGRGTAD--SFVMATAAQCVQKLLSTSGTRLLEPIMALQ 653
            .....|:||.:|.:|::.::.:::..|....::  ||..||.:......|..... ::||||.:.
Yeast   609 FEEVCEKGPLIGHRVLDVKMLINDGAIHAVDSNELSFKTATMSAFRDAFLRAQPV-IMEPIMNVS 672

  Fly   654 IVAPSERISGIMADLSRRRALINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTASMTMQ 717
            :.:|:|....::..|::.:|:|.|. ..|.....:.....|:.:.|::::||..:.|....:::
Yeast   673 VTSPNEFQGNVIGLLNKLQAVIQDT-ENGHDEFTLKAECALSTMFGFATSLRASTQGKGEFSLE 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 218/714 (31%)
MEF1NP_013170.1 FusA 68..760 CDD:223556 218/714 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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