DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and GFM2

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001268231.1 Gene:GFM2 / 84340 HGNCID:29682 Length:811 Species:Homo sapiens


Alignment Length:734 Identity:308/734 - (41%)
Similarity:465/734 - (63%) Gaps:48/734 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLTQERERGITICSSAVTFSW 95
            :|||||||:|||||||||||||:|:|:|.||:||:|..|:||||::.|||||||||.|:||||.|
Human   100 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTFDW 164

  Fly    96 NDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPRLIFVNKM 160
            ..:|:||:|||||:|||:|||:.|..:||.|.|.|.:|||||||:|||.|||||.:||:.|:|||
Human   165 KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHNIPRICFLNKM 229

  Fly   161 DRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAINDVITLERLSWQ-QKDLGRSYRNVKLE 224
            |:..|.|:..|..:::||:.:|:.||.|:........:.||:..|:|.|. ..:.|:.:....|.
Human   230 DKTGASFKYAVESIREKLKAKPLLLQLPIGEAKTFKGVVDVVMKEKLLWNCNSNDGKDFERKPLL 294

  Fly   225 PSDDLRLLQ---EKRNELIDQLSGLDDELADVVIS--TESFDNVDNALIERALRRATTQQKVVPV 284
            ..:|..||:   |.||.||:|::.||||.||:|:.  :|:||.:....::.|:.|.|..|..|||
Human   295 EMNDPELLKETTEARNALIEQVADLDDEFADLVLEEFSENFDLLPAEKLQTAIHRVTLAQTAVPV 359

  Fly   285 LLGSAYKNVGIQRLMDAVNAYLPAPEERN-QIYDCFGTEVAGKVFKIVHDKQRGPLTLVRILRGE 348
            |.|||.||.|||.|:|||..|||:||||| :....:..::....||::||||||||..:||..|.
Human   360 LCGSALKNKGIQPLLDAVTMYLPSPEERNYEFLQWYKDDLCALAFKVLHDKQRGPLVFMRIYSGT 424

  Fly   349 IKRGMRLISARGQ-AEVVSKLYEPLADEYREVSAVQSGDVVICAGLKSTVTGDLLTSSQS----- 407
            ||..:.:.:..|. .|.:|:|..|.||::.|:.::.:|::.:..|||.|.|||.:.||:|     
Human   425 IKPQLAIHNINGNCTERISRLLLPFADQHVEIPSLTAGNIALTVGLKHTATGDTIVSSKSSALAA 489

  Fly   408 ---ALKNAQKRYKQSLGNTAAKVEEDDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQTAMEQA 469
               |.:..:|:::|:              :|::.|.....:||:.|:||:|||||:|.|..:|.|
Human   490 ARRAEREGEKKHRQN--------------NEAERLLLAGVEIPEPVFFCTIEPPSLSKQPDLEHA 540

  Fly   470 LKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAYKETIEAPAL 534
            ||.||||||||:|..|..:|||||.||||||::||..||..||.::..|||||:||:|||.....
Human   541 LKCLQREDPSLKVRLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRETILNSVR 605

  Fly   535 TTLSVEKEIAGSKQSVSITLEVVKNQAELFSLDKSPDNLPNL-----NTLRPRILQV----LRKG 590
            .|.::::.: |.|:.: :|:||.....|..|:      :|.:     .::...:|:|    :..|
Human   606 ATDTLDRTL-GDKRHL-VTVEVEARPIETSSV------MPVIEFEYAESINEGLLKVSQEAIENG 662

  Fly   591 SISALERGPRVGGQVVETQIRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIV 655
            ..||..:||.:|..:.:..|.||:.||..||:.:.:.|..::||||.|..:..::|||:|.|::.
Human   663 IHSACLQGPLLGSPIQDVAITLHSLTIHPGTSTTMISACVSRCVQKALKKADKQVLEPLMNLEVT 727

  Fly   656 APSERISGIMADLSRRRALINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTASMTMQPCG 720
            ...:.:|.::|||::||..|.::..: :.||:::...||||:.|||:.|||::||:|:..::...
Human   728 VARDYLSPVLADLAQRRGNIQEIQTR-QDNKVVIGFVPLAEIMGYSTVLRTLTSGSATFALELST 791

  Fly   721 FSSMNSVDESLAERRAQGL 739
            :.:||..|::....|..||
Human   792 YQAMNPQDQNTLLNRRSGL 810

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 305/726 (42%)
GFM2NP_001268231.1 PRK12739 98..809 CDD:237185 306/731 (42%)
EF-G 104..384 CDD:206673 145/279 (52%)
mtEFG2_II_like 399..480 CDD:293909 31/80 (39%)
EFG_III 518..593 CDD:293919 45/74 (61%)
mtEFG2_like_IV 594..714 CDD:238842 35/127 (28%)
EFG_mtEFG_C 719..795 CDD:239683 26/76 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165141953
Domainoid 1 1.000 291 1.000 Domainoid score I1545
eggNOG 1 0.900 - - E1_COG4108
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6238
Inparanoid 1 1.050 558 1.000 Inparanoid score I1104
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53906
OrthoDB 1 1.010 - - D220174at33208
OrthoFinder 1 1.000 - - FOG0005123
OrthoInspector 1 1.000 - - oto91741
orthoMCL 1 0.900 - - OOG6_103657
Panther 1 1.100 - - LDO PTHR43261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1212
SonicParanoid 1 1.000 - - X4147
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1615.800

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