DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and AT2G45030

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_182029.1 Gene:AT2G45030 / 819110 AraportID:AT2G45030 Length:754 Species:Arabidopsis thaliana


Alignment Length:731 Identity:236/731 - (32%)
Similarity:377/731 - (51%) Gaps:98/731 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WKRSYSSKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTV---TDYLTQERERGITI 86
            ||.| ..|:|||||.||||:||||.|||:|||.|:...:.||...:.|   .|.:..|||:||||
plant    58 WKES-MDKLRNIGISAHIDSGKTTLTERVLFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITI 121

  Fly    87 CSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKL 151
            .|:|...:|.|:::|::|||||:|||:|||::|..:||.::||....||::|::||..|..::::
plant   122 QSAATYCTWKDYKVNIIDTPGHVDFTIEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEV 186

  Fly   152 PRLIFVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAINDVITLERLSWQQKDLGR 216
            ||:.|:||:||..||..|.::..:.||......:|.|:..|:....:.|:|.::...:.    |.
plant   187 PRVAFINKLDRMGADPWKVLNQARAKLRHHSAAVQVPIGLEENFQGLIDLIHVKAYFFH----GS 247

  Fly   217 SYRNVKLE--PSDDLRLLQEKRNELIDQLSGLDDELADVVISTESFDNVDNALIERALRRATTQQ 279
            |..||...  |:|...|:.:||.|||:.:|.:||.||:..::.|.   |..|.:|.|:||||..|
plant   248 SGENVVAGDIPADMEGLVGDKRRELIETVSEVDDVLAEKFLNDEP---VSAAELEEAIRRATIAQ 309

  Fly   280 KVVPVLLGSAYKNVGIQRLMDAVNAYLPAPEE-RNQIYDCFGTE------------VAGKVFKIV 331
            |.|||.:|||:||.|:|.|:|.|.::||:|.| .|...|....|            :....||: 
plant   310 KFVPVFMGSAFKNKGVQPLLDGVVSFLPSPNEVNNYALDQNNNEERVTLTGSPDGPLVALAFKL- 373

  Fly   332 HDKQRGPLTLVRILRGEIKRGMRLISAR-GQAEVVSKLYEPLADEYREVSAVQSGDVVICAGLKS 395
            .:.:.|.||.:|:..|.||:|..:|:.. |:...|.:|....:::..::....:|.:|...|:: 
plant   374 EEGRFGQLTYLRVYEGVIKKGDFIINVNTGKRIKVPRLVRMHSNDMEDIQEAHAGQIVAVFGIE- 437

  Fly   396 TVTGDLLTSSQSALKNAQKRYKQSLGNTAAKVEEDDELDESDELFAIDPQIPDAVYFCSIEPPSV 460
            ..:||..|       :...:|..:..|                       :|:.|...:::|.|.
plant   438 CASGDTFT-------DGSVKYTMTSMN-----------------------VPEPVMSLAVQPVSK 472

  Fly   461 SSQTAMEQALKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAY 525
            .|.....:||.:.|:|||:.||..|..:|||::.||||||:||...|:..|||:|..:|..::.:
plant   473 DSGGQFSKALNRFQKEDPTFRVGLDPESGQTIISGMGELHLDIYVERMRREYKVDATVGKPRVNF 537

  Fly   526 KETIEAPALTTLSVEKEIAGSKQSVSITLEV---VKNQAELFSLDKSPDNLPNLNTLRPRILQVL 587
            :|||...|......:|:..|:.|...:|..|   .....|.|..    :|:.....:....:..:
plant   538 RETITQRAEFDYLHKKQSGGAGQYGRVTGYVEPLPPGSKEKFEF----ENMIVGQAIPSGFIPAI 598

  Fly   588 RKGSISALERGPRVGGQVVETQIRLHNATIGRGTA-DS----FVMA---------TAAQCVQKLL 638
            .||...|...|..:|..|...:|.|   |.|...| ||    |.||         |||:.|    
plant   599 EKGFKEAANSGSLIGHPVENLRIVL---TDGASHAVDSSELAFKMAAIYAFRLCYTAARPV---- 656

  Fly   639 STSGTRLLEPIMALQIVAPSERISGIMADLSRRRALI--NDVLPKGERNKMILVNAPLAELSGYS 701
                  :|||:|.:::..|:|....:..|:::|:.:|  ||  .:|: :.:|..|.||..:.|||
plant   657 ------ILEPVMLVELKVPTEFQGTVAGDINKRKGIIVGND--QEGD-DSVITANVPLNNMFGYS 712

  Fly   702 SALRTISSGTASMTMQ 717
            ::||:::.|....||:
plant   713 TSLRSMTQGKGEFTME 728

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 233/725 (32%)
AT2G45030NP_182029.1 PRK12740 71..744 CDD:237186 227/717 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D637899at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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