DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and eEF1alpha2

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:494 Identity:103/494 - (20%)
Similarity:173/494 - (35%) Gaps:160/494 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NIGILAHIDAGKTTTTERMLFYAG----KT-----RALGEVHRGN----TVTDYLTQERERGITI 86
            ||.::.|:|:||:|||..:::..|    :|     :...|:.:|:    .|.|.|..||||||||
  Fly     9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73

  Fly    87 CSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVD-GVVVVLDGTAGVEAQTVTVWSQADKHK 150
            ..:...|..:.:.:.::|.|||.||...:.......| .|::|..||...|| .::...|..:|.
  Fly    74 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA-GISKNGQTREHA 137

  Fly   151 L--------PRLIFVNKMDRPD--------ADFEKCVSDLKDKLETQPVCLQY-PVKNEDGVLAI 198
            |        ..::.|||||..:        .:.:|.||....|:...|..:.: |:.        
  Fly   138 LLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPIS-------- 194

  Fly   199 NDVITLERLSWQQKDLGRSYRNVKLEPSDDLRLLQ---EKRNE-------LIDQLSGL------D 247
                     .|...::        ||||:.:...:   .:|.|       |||.|..:      .
  Fly   195 ---------GWHGDNM--------LEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPT 242

  Fly   248 DE-----LADVV----ISTESFDNVDNALIERAL------RRATTQQKVVPV------------L 285
            |:     |.||.    |.|.....|:..|::..:      ....|:.|.|.:            .
  Fly   243 DKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDN 307

  Fly   286 LGSAYKNVGIQRLM------------------------------DAVNAYLPAPEERNQIYDCFG 320
            :|...|||.::.|.                              ...|.|.|       :.||..
  Fly   308 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTP-------VLDCHT 365

  Fly   321 TEVAGKVFKIVH--DKQRGPLTLVRILRGEIKRGMRLISARGQAEVVSKLYEPLADE-------- 375
            ..:|.|..:|..  |::.|..|         :...:.|.:...|.:|....:||..|        
  Fly   366 AHIACKFSEIKEKCDRRTGKTT---------ETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPL 421

  Fly   376 ----YREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALK 410
                .|::....:..|:.....|.|.:|.:..:::.|.|
  Fly   422 GRFAVRDMRQTVAVGVIKSVNFKETTSGKVTKAAEKAQK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 103/494 (21%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 100/482 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464603
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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