DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and eEF1alpha2

DIOPT Version :10

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_524611.1 Gene:eEF1alpha2 / 43736 FlyBaseID:FBgn0000557 Length:462 Species:Drosophila melanogaster


Alignment Length:494 Identity:103/494 - (20%)
Similarity:173/494 - (35%) Gaps:160/494 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NIGILAHIDAGKTTTTERMLFYAG----KT-----RALGEVHRGN----TVTDYLTQERERGITI 86
            ||.::.|:|:||:|||..:::..|    :|     :...|:.:|:    .|.|.|..||||||||
  Fly     9 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITI 73

  Fly    87 CSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVD-GVVVVLDGTAGVEAQTVTVWSQADKHK 150
            ..:...|..:.:.:.::|.|||.||...:.......| .|::|..||...|| .::...|..:|.
  Fly    74 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEA-GISKNGQTREHA 137

  Fly   151 L--------PRLIFVNKMDRPD--------ADFEKCVSDLKDKLETQPVCLQY-PVKNEDGVLAI 198
            |        ..::.|||||..:        .:.:|.||....|:...|..:.: |:.        
  Fly   138 LLAFTLGVKQLIVGVNKMDSTEPPYSEARYEEIKKEVSSYIKKIGYNPASVAFVPIS-------- 194

  Fly   199 NDVITLERLSWQQKDLGRSYRNVKLEPSDDLRLLQ---EKRNE-------LIDQLSGL------D 247
                     .|...::        ||||:.:...:   .:|.|       |||.|..:      .
  Fly   195 ---------GWHGDNM--------LEPSEKMPWFKGWSVERKEGKAEGKCLIDALDAILPPQRPT 242

  Fly   248 DE-----LADVV----ISTESFDNVDNALIERAL------RRATTQQKVVPV------------L 285
            |:     |.||.    |.|.....|:..|::..:      ....|:.|.|.:            .
  Fly   243 DKPLRLPLQDVYKIGGIGTVPVGRVETGLLKPGMVVNFAPVNLVTEVKSVEMHHEALTEAMPGDN 307

  Fly   286 LGSAYKNVGIQRLM------------------------------DAVNAYLPAPEERNQIYDCFG 320
            :|...|||.::.|.                              ...|.|.|       :.||..
  Fly   308 VGFNVKNVSVKELRRGYVAGDSKNNPPRGAADFTAQVIVLNHPGQIANGYTP-------VLDCHT 365

  Fly   321 TEVAGKVFKIVH--DKQRGPLTLVRILRGEIKRGMRLISARGQAEVVSKLYEPLADE-------- 375
            ..:|.|..:|..  |::.|..|         :...:.|.:...|.:|....:||..|        
  Fly   366 AHIACKFSEIKEKCDRRTGKTT---------ETEPKAIKSGDAAIIVLVPSKPLCVESFQEFPPL 421

  Fly   376 ----YREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALK 410
                .|::....:..|:.....|.|.:|.:..:::.|.|
  Fly   422 GRFAVRDMRQTVAVGVIKSVNFKETTSGKVTKAAEKAQK 460

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 FusA 30..734 CDD:440248 103/494 (21%)
eEF1alpha2NP_524611.1 PTZ00141 1..450 CDD:185474 100/482 (21%)

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