Protein Alignment mRRF2 and CG4849

DIOPT Version :9

• Sequence 1: NP_732771.2
• Gene: mRRF2 / 42670
• FlyBaseID: FBgn0051159
• Length: 740
• Species: Drosophila melanogaster
• Sequence 2: NP_651605.1
• Gene: CG4849 / 43358
• FlyBaseID: FBgn0039566
• Length: 975
• Species: Drosophila melanogaster
• Alignment Length: 872
• Identity: 177/872 - (20%)
• Similarity: 318/872 - (36%)
• Gaps: 296/872 - (33%)

  Fly    33 IRNIGILAHIDAGKTTTTERML------FYAGKTRALGEVHRGNTVTDYLTQERERGITICSSAV 91
            |||:.::.|:..||||..:.::      |...:.|.|       ..||.|..|:|||.:|.::.|
  Fly   131 IRNVALVGHLHHGKTTFVDCLIRQTHPQFETMEERQL-------RYTDTLFTEQERGCSIKATPV 188

  Fly    92 TFSWND-----HRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKL 151
            |....|     :.:|:.|||||::|:.|...::...||||:.:|...||...|..:...|.:.:.
  Fly   189 TLVLQDVKQKSYLLNIFDTPGHVNFSDEATAAMRMSDGVVLFIDAAEGVMLNTERLLKHAVQERQ 253

  Fly   152 PRLIFVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLA----------INDVI---- 202
            ...:.:||:||       .:.:||...:.....|::.|:..:|:|:          ::.::
  Fly   254 AITVCINKIDR-------LILELKLPPQDAYFKLKHIVEEVNGLLSTYGAPDDNLLVSPILGNVC 311

  Fly   203 ----------TLER--------------LSWQQKDLGRSYRNVKL------EPSDD-----LRLL 232
                      ||:.              |.:.::..|..|.|.|.      :|.:.     :..:
  Fly   312 FASSLYGFCFTLKSFAKLYADTYEGVAYLDFAKRLWGDMYFNSKTRKFSKKQPHNSAQRSFVEFI 376

  Fly   233 QEKRNELIDQLSG-----LDDELAD--VVISTESFDNVDNALIERALRR---------------- 274
            .|...:||.|:.|     |.|.||:  |.:|.|...:....|:.....|
  Fly   377 LEPMYKLIAQVVGDVDTTLSDTLAELNVRVSKEEMKSNIRPLLRLVCNRFMGDCSGFVDMCVEHI 441

  Fly   275 ----ATTQQKVVPVLLGSAYKNVGIQRLMDAVNAYLPAPEERNQIY---DCFGTEVAGKVFKIVH 332
                ...::||..:..|.  |...|.|.|.:.|.|.......:::|   ||...:|
  Fly   442 KSPLENAKRKVDHIYTGP--KEGDIYRDMISCNQYGTLMVHSSKMYPNDDCTFFQV--------- 495

  Fly   333 DKQRGPLTLVRILRGEIKRGMRLISARGQAEVVSKLYEPLADE-----------------YR-EV 379
                    |.||:.|.:..|.       :..|:.:.| .|.||                 |: |:
  Fly   496 --------LARIVSGTLHAGQ-------EVRVLGENY-TLQDEEDSRILQVGRLWVFESRYKVEL 544

  Fly   380 SAVQSGDVVICAGLKSTVTGDLLTSSQSALKNAQKRYKQSLGNTAAKVEEDDELDESDELFAIDP 444
            :.|.:|:.|:..|:...:   :.||:                                   .:|.
  Fly   545 NRVPAGNWVLIEGIDQCI---VKTST-----------------------------------IVDI 571

  Fly   445 QIPDAVYF-------------CSIEPPSVSSQTAMEQALKQLQREDPSLRVSYDSVTGQTVLGGM 496
            .:|:.:|.             .::||.:.|....|...|:::.:..|.|....:. :|:.|:.|.
  Fly   572 NVPEDLYIFRPLKFNTQSIIKIAVEPVNPSELPKMLDGLRKVNKSYPLLSTRVEE-SGEHVILGT 635

  Fly   497 GELHMDIIKSRILSEY-KIDVDLGPLQIAYKETI----------EAP----ALTTLS--VEKEIA 544
            |||::|.:...:...| :||:.:....:|:.||:          |.|    .:|.:|  :||.:|
  Fly   636 GELYLDCVMHDLRKMYSEIDIKVADPVVAFCETVVETSSLKCFAETPNKKNKITMISEPLEKGLA 700

  Fly   545 GSKQSVSITLEVVKNQ-AELFSLDKS-----------------------PDNLPN------LNTL 579
            ...::.::.:...|.: .|.|.::..                       .|.||:      |..:
  Fly   701 EDIENGTVCINWNKKRIGEFFQVNYDWDLLAARSIWAFGPDSTGPNILVDDTLPSEVDKNLLTAV 765

  Fly   580 RPRILQVL----RKGSI-------------------SALERGPRVGGQVVETQIRLHNATIGRGT 621
            :..|:|..    |:|.:                   .||.||   |||::.|..|:        .
  Fly   766 KDSIVQGFQWGTREGPLCEEPIRNVKFKILDGVIANEALHRG---GGQIIPTARRV--------A 819

  Fly   622 ADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMADLSRRRALINDVLP-KGERN 685
            ..:|:|||             .||:||.:.:::.||::.:|.:...|:|||..:....| .|...
  Fly   820 YSAFLMAT-------------PRLMEPYLFVEVQAPADCVSAVYTVLARRRGHVTQDAPVSGSPI 871

  Fly   686 KMILVNAPLAELSGYSSALRTISSGTA 712
            ..|....|..:..|:.:.|||.:.|.|
  Fly   872 YTIKAFIPAIDSFGFETDLRTHTQGQA 898

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
mRRF2	NP_732771.2	PRK12739	31..733	CDD:237185	177/872 (20%)
CG4849	NP_651605.1	EFTUD2	4..111	CDD:292623
		PTZ00416	115..957	CDD:240409	177/872 (20%)
		Snu114p	132..340	CDD:206730	50/221 (23%)
		Translation_Factor_II_like	477..568	CDD:295476	22/153 (14%)
		snRNP_III	589..660	CDD:293921	17/71 (24%)
		EF2_IV_snRNP	660..837	CDD:238840	38/200 (19%)
		eEF2_C_snRNP	832..911	CDD:239765	19/67 (28%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45464559
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	2	1.840