DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and eIF2gamma

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001262587.1 Gene:eIF2gamma / 41843 FlyBaseID:FBgn0263740 Length:475 Species:Drosophila melanogaster


Alignment Length:479 Identity:85/479 - (17%)
Similarity:146/479 - (30%) Gaps:209/479 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLTQERERGITI------------- 86
            |||.:.|:..||:|.          .:|:..|.     |.....|.||.|||             
  Fly    42 NIGTIGHVAHGKSTV----------VKAISGVQ-----TVRFKNELERNITIKLGYANAKIYKCD 91

  Fly    87 ---CSSAVTF-----SWND----------------HRINLLDTPGH-------------IDFT-- 112
               |....:|     |.:|                ..::.:|.|||             :|..  
  Fly    92 NPKCPRPASFVSDASSKDDSLPCTRLNCSGNFRLVRHVSFVDCPGHDILMATMLNGAAVMDAALL 156

  Fly   113 ----------------------MEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQAD-------- 147
                                  |:::|.|...:.:.::.:..|..:.:.:|.:.|..        
  Fly   157 LIAGNESCPQPQTSEHLAAIEIMKLKQILILQNKIDLIKESQAKEQYEEITKFVQGTVAEGAPII 221

  Fly   148 ------KHKLPRL--IFVNKMDRPDADFEK----------------C-VSDLK------------ 175
                  |:.:..|  ..|||:..|..||..                | |:|||            
  Fly   222 PISAQLKYNIDVLCEYIVNKIPVPPRDFNAPPRLIVIRSFDVNKPGCEVADLKGGVAGGSILSGV 286

  Fly   176 ----DKLETQPVCLQYPVKNEDGVLAINDVIT-LERLSWQQKDL------GRSYRNVKLEPSDDL 229
                .::|.:|..:   .|:.||.:....:.: :..|..:|.:|      |......|::|:   
  Fly   287 LKVGQEIEVRPGVV---TKDSDGNITCRPIFSRIVSLFAEQNELQYAVPGGLIGVGTKIDPT--- 345

  Fly   230 RLLQEKRNELIDQLSGLDDELADVVISTESFDNVDNALIERALRRATTQQKVVPVLLGSAYKNVG 294
             |.:..|  |:.|:.|...:|.|:....|    :...|:.|.|...|...|          |...
  Fly   346 -LCRADR--LVGQVLGAVGQLPDIYQELE----ISYYLLRRLLGVRTDGDK----------KGAR 393

  Fly   295 IQRLMDAVNAYLPAPEERNQIYDCFGTEVAGKVFKIVHDKQRGPLTLVRILRGEIKRGMRLISAR 359
            :::|                                    |:..:.||.|  |.:..|.|:.:.:
  Fly   394 VEKL------------------------------------QKNEILLVNI--GSLSTGGRISATK 420

  Fly   360 GQ-AEVVSKLYEPLADEYREVSAV 382
            |. |::|  |..|:..|..|..|:
  Fly   421 GDLAKIV--LTTPVCTEKGEKIAL 442

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 85/479 (18%)
eIF2gammaNP_001262587.1 PTZ00327 11..465 CDD:240362 85/479 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464574
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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