DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and mEFTu2

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_610288.1 Gene:mEFTu2 / 35681 FlyBaseID:FBgn0033184 Length:456 Species:Drosophila melanogaster


Alignment Length:446 Identity:89/446 - (19%)
Similarity:151/446 - (33%) Gaps:167/446 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 NIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLT--------QERERGITICSSAV 91
            |:|.:.|:|.||||.          |.|:..:.....:.:||:        :|:.|||||.:..:
  Fly    59 NVGTIGHVDHGKTTL----------TAAITRIQSQKGLAEYLSYDQIDRAPEEKARGITINACHI 113

  Fly    92 TFSWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPRLI- 155
            .:|..:......|.|||.|:...:......:||.::|:..|.|...||......|.:..:.|:| 
  Fly   114 GYSTTERTYAHTDCPGHADYIKNMISGASQMDGAILVVAATDGQMPQTREHLLLAKQVGIQRIIV 178

  Fly   156 FVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAINDVITLERLSWQQKDLGRSYRN 220
            |:||.|..|.:                            ||.:.::...|.||    |.|     
  Fly   179 FINKADLVDQE----------------------------VLELVEIEMREMLS----DFG----- 206

  Fly   221 VKLEPSDDLRLLQEKRNELIDQLSGLDDELADVVISTESFDNVDNALIERALRRATTQQKVVPVL 285
                                                   ||.|::                 ||:
  Fly   207 ---------------------------------------FDGVNS-----------------PVI 215

  Fly   286 LGSA----------YKNVGIQRLMDAVNAYLPAPEERNQIYDCFGTEVAGKVFKIVHDKQRGPLT 340
            .|||          :....|::|::..::|:|.|:  ..|...|...: ...|.:   ..||.:.
  Fly   216 CGSALLALREDKSEFGVPSIEKLLEQCDSYIPTPQ--RDISSPFILPI-DNAFTV---PGRGTVV 274

  Fly   341 LVRILRGEIKRG---------------------MRLISARGQA-EVVSKLYEPLADEYREVSAVQ 383
            :..|.||.|.|.                     .|....:.|| |.|..|...:     ::|||:
  Fly   275 VGTIKRGTIPRNADADLLGFNQNLKTSISDIQIFRKSVPQAQAGENVGALLRGI-----KISAVE 334

  Fly   384 SGDVVICA----GLKSTVTGDLLTSSQS---ALKNAQKRYKQSL----GNTAAKVE 428
            .| :::||    .:.:...|.:...|::   .:|....:|.|.|    .|..|:::
  Fly   335 RG-MLLCATGSEDISNHFEGSMYLLSRAEGGRVKPMLSKYIQQLFSQTWNVPARID 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 89/446 (20%)
mEFTu2NP_610288.1 PRK00049 53..437 CDD:234596 89/446 (20%)
EF_Tu 56..249 CDD:206671 58/292 (20%)
EFTU_II 257..343 CDD:293898 21/95 (22%)
mtEFTU_III 347..437 CDD:294005 8/43 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464588
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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