DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and Gfm2

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_001258392.1 Gene:Gfm2 / 320806 MGIID:2444783 Length:779 Species:Mus musculus


Alignment Length:722 Identity:303/722 - (41%)
Similarity:461/722 - (63%) Gaps:27/722 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 SKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLTQERERGITICSSAVTFSW 95
            :|||||||:|||||||||||||:|:|:|.||:||:|..|:||||::.|||||||||.|:|||..|
Mouse    68 AKIRNIGIMAHIDAGKTTTTERILYYSGYTRSLGDVDDGDTVTDFMAQERERGITIQSAAVTLDW 132

  Fly    96 NDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQADKHKLPRLIFVNKM 160
            ..:|:||:|||||:|||:|||:.|..:||.|.|.|.:|||||||:|||.||||||:||:.|:|||
Mouse   133 KGYRVNLIDTPGHVDFTLEVERCLRVLDGAVAVFDASAGVEAQTLTVWRQADKHKIPRICFLNKM 197

  Fly   161 DRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGVLAINDVITLERLSW-QQKDLGRSYRNVKLE 224
            |:..|.|...|..:::||:.:|:.||.|:........:.||:..|:|.| ...|.|:.:..:.|.
Mouse   198 DKTGASFNYAVESIREKLKAKPLILQLPIGEARTFQGVVDVVNKEKLLWNSNSDDGKDFERMPLS 262

  Fly   225 PSDDLRLLQ---EKRNELIDQLSGLDDELADVVIS--TESFDNVDNALIERALRRATTQQKVVPV 284
            .:.|..||:   |.||.||:|::.||||.||:|:.  :|:||.|....::.|:.|.|..|..|||
Mouse   263 EASDRELLKETIEARNSLIEQVADLDDEFADLVLGEFSENFDLVPAEKLQAAVHRVTLAQAAVPV 327

  Fly   285 LLGSAYKNVGIQRLMDAVNAYLPAPEER-NQIYDCFGTEVAGKVFKIVHDKQRGPLTLVRILRGE 348
            |.|||.||.|:|.|:|||..|||:|||| ::....:..::....||::||||||||..:||..|.
Mouse   328 LCGSALKNKGVQPLLDAVTTYLPSPEEREDRFLQWYEGDLCALAFKVLHDKQRGPLVFLRIYSGT 392

  Fly   349 IKRGMRLISA-RGQAEVVSKLYEPLADEYREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALKNA 412
            :...:.:.:. |...|.:|:|..|.||::.|:.::.:|::.:..|||.|.|||.:.||:|:...|
Mouse   393 LTPQLAVHNINRNCTERMSRLLLPFADQHVEIPSLTAGNIALTVGLKQTATGDTIVSSKSSALAA 457

  Fly   413 QKRYKQSLGNTAAKVE-EDDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQTAMEQALKQLQRE 476
            .:|        |.:.| |..:..|::.|.....::|:.|:||:||||||:.|..::.||::||||
Mouse   458 ARR--------AGRGEREHGKKREAESLLLAGVEVPEPVFFCTIEPPSVAKQPDLDHALERLQRE 514

  Fly   477 DPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAYKETIEAPALTTLSVEK 541
            ||||:|..|..:|||||.||||||::||..||..||.::..|||||:||:|||......|.::::
Mouse   515 DPSLKVKLDPDSGQTVLCGMGELHIEIIHDRIKREYGLETYLGPLQVAYRETILNSVRATDTLDR 579

  Fly   542 EIAGSKQSVSITLEVVKNQAELFSLDKSPDNLPNLNTLRPRILQVLRKGSISALE----RGPRVG 602
            .:...:..||..|| |:...|..::.|    :...:.:...:||..|:...||:.    :||.:|
Mouse   580 VLGDKRHLVSAELE-VRPAEEPCAVAK----IEYADCVGEDLLQASREAIESAVHSACLQGPLLG 639

  Fly   603 GQVVETQIRLHNATIGRGTADSFVMATAAQCVQKLLSTSGTRLLEPIMALQIVAPSERISGIMAD 667
            ..|.:..:.||:..|..||:.:.|.|..::|:||.|..:..::|||:|:|::....|.:|.::||
Mouse   640 SPVQDVAMTLHSLMIHPGTSTTMVTACISRCMQKALKKADKQVLEPLMSLEVTVSREYLSPVLAD 704

  Fly   668 LSRRRALINDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTASMTMQPCGFSSMNSVDESLA 732
            |::||..|.::..: :.|:::|...||||:.|||:.|||::||:|:..::...:.:|:..|:|..
Mouse   705 LAQRRGNIQEIQTR-QDNRVVLGFVPLAEIMGYSTVLRTLTSGSATFALELSTYQAMSPQDQSAL 768

  Fly   733 ERRAQGL 739
            ..:..||
Mouse   769 LNQRSGL 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 301/714 (42%)
Gfm2NP_001258392.1 PRK12739 66..774 CDD:237185 301/719 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167831996
Domainoid 1 1.000 296 1.000 Domainoid score I1474
eggNOG 1 0.900 - - E1_COG4108
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6238
Inparanoid 1 1.050 549 1.000 Inparanoid score I1134
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53906
OrthoDB 1 1.010 - - D220174at33208
OrthoFinder 1 1.000 - - FOG0005123
OrthoInspector 1 1.000 - - oto95321
orthoMCL 1 0.900 - - OOG6_103657
Panther 1 1.100 - - LDO PTHR43261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1212
SonicParanoid 1 1.000 - - X4147
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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