DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and SPBC660.10

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_595089.1 Gene:SPBC660.10 / 2541108 PomBaseID:SPBC660.10 Length:813 Species:Schizosaccharomyces pombe


Alignment Length:821 Identity:248/821 - (30%)
Similarity:400/821 - (48%) Gaps:144/821 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MLKYAWQSGPKQSNRWLWHLSNQIWKRSYS----SKIRNIGILAHIDAGKTTTTERMLFYAGKTR 61
            ||:..|:  |.:       :...:|:|..|    :.|||:||:|||||||||.||:||:|.|.|.
pombe     1 MLRIVWK--PLK-------IRLPVWRRYQSNISINSIRNVGIIAHIDAGKTTLTEKMLYYGGFTS 56

  Fly    62 ALGEVHRGNTVTDYLTQERERGITICSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVV 126
            ..|.|..|:||.|||..||:|||||.|:|::|:|.:.||||:|||||.|||.|||:|:..:||.|
pombe    57 HFGNVDTGDTVMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAV 121

  Fly   127 VVLDGTAGVEAQTVTVWSQADKHKLPRLIFVNKMDRPDADFEKCVSDLKDKLE-TQPVCLQYPVK 190
            .::||:|||||||..||.||.|..:|::||||||||..:.....:..:...|: ..|:.||.||.
pombe   122 AIIDGSAGVEAQTKVVWKQATKRGIPKVIFVNKMDRVGSSLGSTIRSIYTNLDCPYPLVLQLPVY 186

  Fly   191 NEDGV-----LAINDVITLERLSWQQKD--LGRSYRNVKLEPSDDLRLLQ--EKRNELIDQLSGL 246
            : ||:     |.|.|::..:.:.|...|  ||....:|:..|..:..:.:  |.||.|:..|..:
pombe   187 S-DGLQERKFLGILDILQQKMILWDTSDNKLGTDGTHVQELPIPESHMERFIEARNALVMSLCDV 250

  Fly   247 DDELADVVISTESFDNVDNALIERALRRATTQQKVVPVLLGSAYKNVGIQRLMDAVNAYLPAPEE 311
            |:.|.|..:..|......|..:.:.:::.|....|||||.||:.||:.:|.:|||:..|||:|.|
pombe   251 DETLCDEYLENEDSLAFTNDRLFKIIKQKTISGNVVPVLCGSSLKNIAVQPIMDAIIDYLPSPVE 315

  Fly   312 -----------RNQIYDCFGTEVAGKVFKIVHDKQRGPLTLVRILRGEIKRGMRLISAR-GQAEV 364
                       .::|.......:..|:||::|...||.||.||:..|.:.|||.:.:.| .::|.
pombe   316 FYEKNASKETSSDKIISLDKRPLLAKIFKVIHHASRGILTYVRVNEGTLSRGMMMFNPRTKKSER 380

  Fly   365 VSKLYEPLADEYREVSAVQSGDVVICAGLKSTVTGDLLTSSQSALKNAQKRYKQSLGNTAAKVEE 429
            ..:||...||:.:||..:.:|::.:.:|:|...|||::.:.:::     |.:.:.|....:.:  
pombe   381 AIRLYNVFADQTQEVDCISAGNIGVISGIKQFHTGDIIINKENS-----KNFHEYLSGNQSVI-- 438

  Fly   430 DDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQTAMEQALKQLQREDPSLRVSYDSVTGQTVLG 494
                           .||:.|...||||.|:..:.|:.:||..:.|||||.|.:.|...||.::.
pombe   439 ---------------SIPEPVCIASIEPYSLKDEPALLEALANMNREDPSFRYTQDLENGQLLIQ 488

  Fly   495 GMGELHMDIIKSRILSEYKIDVDLGPLQIAYKETIEAPALTTLSVEKEIAGSKQSVSI------- 552
            |||.:|:.:...|::||:.....||.:|:.|:||:...:..::::..|   :|:::.|       
pombe   489 GMGIMHLQVSYERLVSEFGARASLGKVQVGYRETLIDVSFNSVTLSTE---NKENLIINVYLIPI 550

  Fly   553 ------TLEVVKNQAELFSLDK------------SPDN---LPNLNTLRPRILQVLRKGSISALE 596
                  ||:...::.|:..:..            .|:|   ||:..:.: ||.:.:..|.::.|.
pombe   551 SDEGDETLKKYFSEGEIQKVRSKGQEDGVLFYGWKPENSCTLPDHLSFQ-RIQENIYFGIVAGLS 614

  Fly   597 RGPRVGGQVVETQIRLHNATIGRGTADSFVMATAAQCVQKLL----------STSGTRLLEPIMA 651
            .||..|..:...|   ...||....::.|.::...|...|..          |....|:|||.|.
pombe   615 HGPLHGFPLTNLQ---SFCTISSFLSNDFPLSLLTQASMKATKNAVFSLYKRSPKSFRILEPYMD 676

  Fly   652 LQIVAPSERISGIMADL-SRRRALINDV-----------------------LPKGERN------- 685
            :.|..|.|.:..:..|| .:|.|.|.::                       ||..|.:       
pombe   677 VTITTPEEYVGIVSKDLVGKRGATIKEITEIGKNAASKDSQIAIGILGERYLPADEPSSVKANNA 741

  Fly   686 ----------KMILVNAPLAELSGYSSALRTISSGTASMTM 716
                      |.|....||.::..|:|.:.:::.|.|...|
pombe   742 SSLLQSSSVIKCIRAQVPLEQILDYNSVISSLTKGNAKFLM 782

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 241/787 (31%)
SPBC660.10NP_595089.1 FusA 24..810 CDD:223556 241/789 (31%)
EF-G 30..313 CDD:206673 124/283 (44%)
mtEFG2_II_like 338..420 CDD:293909 28/81 (35%)
EFG_III 441..516 CDD:293919 28/74 (38%)
EFG_C 669..783 CDD:279069 25/114 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 229 1.000 Domainoid score I510
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6238
Inparanoid 1 1.050 349 1.000 Inparanoid score I484
OMA 1 1.010 - - QHG53906
OrthoFinder 1 1.000 - - FOG0005123
OrthoInspector 1 1.000 - - oto102122
orthoMCL 1 0.900 - - OOG6_103657
Panther 1 1.100 - - LDO PTHR43261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1212
SonicParanoid 1 1.000 - - X4147
TreeFam 1 0.960 - -
1312.960

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