DRSC/TRiP Functional Genomics Resources

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Protein Alignment mRRF2 and Y119D3B.14

DIOPT Version :9

Sequence 1:NP_732771.2 Gene:mRRF2 / 42670 FlyBaseID:FBgn0051159 Length:740 Species:Drosophila melanogaster
Sequence 2:NP_497345.2 Gene:Y119D3B.14 / 191043 WormBaseID:WBGene00022491 Length:731 Species:Caenorhabditis elegans


Alignment Length:740 Identity:267/740 - (36%)
Similarity:415/740 - (56%) Gaps:46/740 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 KRSYS--------SKIRNIGILAHIDAGKTTTTERMLFYAGKTRALGEVHRGNTVTDYLTQERER 82
            :|.||        ||:||||::||:||||||.|||:|:.||.....|.|.:||||||:|..||||
 Worm    10 RRCYSTPPPPPAPSKLRNIGVIAHVDAGKTTVTERLLYLAGAIHVAGHVDKGNTVTDFLDIERER 74

  Fly    83 GITICSSAVTFSWNDHRINLLDTPGHIDFTMEVEQSLYAVDGVVVVLDGTAGVEAQTVTVWSQAD 147
            |||:.|:||...|..|||||:|||||:||.:|||:.:..:||:|||:||:|||:.||:|||.|:.
 Worm    75 GITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAGVQPQTLTVWRQSS 139

  Fly   148 KHKLPRLIFVNKMDRPDADFEKCVSDLKDKLETQPVCLQYPVKNEDGV-LAINDVITLERLSWQQ 211
            |.|||...|:||||:..|:||..|..::.||..:.|.|..|:....|. ....|::..:.|....
 Worm   140 KFKLPAHFFINKMDKLAANFENSVDSVEQKLGVRAVKLVVPLPENRGFNRGFLDILHSKMLPGNS 204

  Fly   212 KDLGRSYRNVKLEPSDDLRLLQEKRNELIDQLSGLDDELADVVIS-TESFD----NVDNALIERA 271
            |:.....:|     |.:..||.|.::||...|:   |..||.... .:.||    .:|...::..
 Worm   205 KNWQNPPKN-----SPEAELLAEHKSELCFTLA---DSHADFQSKFLDEFDGNSEKIDVIEMKSV 261

  Fly   272 LRRATTQQKVVPVLLGSAYKNVG-IQRLMDAVNAYLPAPEERNQIY-DCFGTEVAGKVFKIVHDK 334
            ||..|...|:..:..|||.|||. ::.::|||..:.||||.||:.: |.||.:::|.||||.|||
 Worm   262 LRELTCASKIATISCGSAVKNVHCVKPVLDAVVDFFPAPEMRNREFRDVFGEDLSGLVFKITHDK 326

  Fly   335 QRGPLTLVRILRGEIKRGMRLI-SARGQAEVVSKLYEPLADEYREVSAVQSGDVVICAGLKSTVT 398
            :||.|:.:||..|.:.....:. :::..:|...||:.|.|||.|.|..|.:|::.:.|||::|||
 Worm   327 RRGQLSYMRIYTGSLHNNSTIFNTSQMTSEGPLKLFTPYADELRLVEQVSAGNITVVAGLQTTVT 391

  Fly   399 GDLLTSSQSALKNAQKRYKQSLGNTAAKVEEDDELDESDELFAIDPQIPDAVYFCSIEPPSVSSQ 463
            ||.:.:|.:   :|:|..::..|:.::.:...|    .:.:.....:.||||:||.|||||....
 Worm   392 GDTVVASSA---SAEKACQKLAGSESSLLSPKD----GNSVVFSGIESPDAVFFCCIEPPSNRQL 449

  Fly   464 TAMEQALKQLQREDPSLRVSYDSVTGQTVLGGMGELHMDIIKSRILSEYKIDVDLGPLQIAYKET 528
            ....:||::|.|||||:::.:|..||||::...||||::.||.|:...||:||.:|.||:||:|.
 Worm   450 NQFNKALEELTREDPSMKIRFDRDTGQTIVETQGELHLEAIKDRLKRNYKLDVFIGKLQVAYREM 514

  Fly   529 IEAPALTTLSVEKEIAGSK--QSVSITLEVVKNQAELFSLDKSPDNLPNLNTLRPRIL---QVLR 588
            :......|..||..::..|  :.|.:|:.:...||.: ...|....||  .|.||..|   :.:.
 Worm   515 LTEELSYTAKVEDGLSEKKRPEFVQLTMRLEPTQAHI-PFKKIELELP--QTARPVRLDWQKAVN 576

  Fly   589 KGSISALERGPRVGGQVVETQIRLHNATIGRGTADSFVMATAAQ-CVQKLLSTSGTRLLEPIMAL 652
            :|..:||:.||.....|...::.|....:..|..:..:::..|| ||.:.||:....|.||:|.:
 Worm   577 EGCSNALQNGPLASYPVHAVRVVLTECIVSGGKINPALLSACAQKCVSEALSSGEMVLTEPVMEV 641

  Fly   653 QI-VAPSERISGIMADLSRRRALI--NDVLPKGERNKMILVNAPLAELSGYSSALRTISSGTASM 714
            || :...:....|:.:|.||||..  :|.....|..::..: .||:|....|..:||::||...:
 Worm   642 QIEIRNDDPTQPILNELLRRRAHFEHSDATESTEIRRICAI-LPLSETENLSKTVRTLTSGFGDI 705

  Fly   715 TMQPCGFSSMNSVDE-SLAERRAQG 738
            ::|..|:..:...:: .:.::||.|
 Worm   706 SVQFRGYQQVTEHEKMEILKKRATG 730

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mRRF2NP_732771.2 PRK12739 31..733 CDD:237185 261/720 (36%)
Y119D3B.14NP_497345.2 FusA 23..727 CDD:223556 261/722 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160156688
Domainoid 1 1.000 208 1.000 Domainoid score I1672
eggNOG 1 0.900 - - E1_COG4108
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H6238
Inparanoid 1 1.050 415 1.000 Inparanoid score I1026
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53906
OrthoDB 1 1.010 - - D220174at33208
OrthoFinder 1 1.000 - - FOG0005123
OrthoInspector 1 1.000 - - oto17810
orthoMCL 1 0.900 - - OOG6_103657
Panther 1 1.100 - - LDO PTHR43261
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1212
SonicParanoid 1 1.000 - - X4147
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1716.800

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