DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31156 and Srbd1

DIOPT Version :9

Sequence 1:NP_651070.3 Gene:CG31156 / 42669 FlyBaseID:FBgn0051156 Length:948 Species:Drosophila melanogaster
Sequence 2:XP_011245030.1 Gene:Srbd1 / 78586 MGIID:1925836 Length:995 Species:Mus musculus


Alignment Length:1011 Identity:346/1011 - (34%)
Similarity:530/1011 - (52%) Gaps:145/1011 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KRPRRAASTKKIVIEISDSDEEVNLTADDDYRPEETKSRIIDRAADAQTVVTKRQRFPTSK--KT 65
            ::|....|.:|.......|.::|:..:.|....||..|.:....||.:   .|..:..|:|  ||
Mouse    52 RQPASKGSKRKQGPRAKKSSQQVDDESKDVAVKEELNSPVAIVDADLE---EKSHKLQTTKTLKT 113

  Fly    66 AA---EGPAPKKKRGDKEKADE---NACPNENNPESVVQDTPSTSNQRNGAVGTEHNSEAPAPKR 124
            ||   :.|.|:.|:  :.|.||   .|.|.|....:|  :|||||     |.|.....|      
Mouse   114 AAKKQKKPVPRAKK--RLKVDEETSQASPLEGGGSNV--ETPSTS-----ACGNVCKKE------ 163

  Fly   125 KRARKDKED--------LKTAANETNPEKGDVVPSTAVTQPNDIVASSSHNKSSTGRSSFWERRK 181
                 :.||        :|....|:.|:..   |:......:||......|              
Mouse   164 -----ESEDSFTFGQSPVKRIRTESCPQGR---PARVPDGVSDIKEEVEMN-------------- 206

  Fly   182 VWNIDELLAETESIQPQAARNIVKLFEDENTIPFICRYRRDLVDHIAPDRLRDIRNTYTEIVDLR 246
             |::.::|:|..:|:|....||::||.|:||||||.|||::|::::..|.||::|.|..|:.|:.
Mouse   207 -WDVVQVLSERTNIEPWVCANIIRLFNDDNTIPFIVRYRKELINNLDADFLREVRQTLDELRDVA 270

  Fly   247 KRAENIIGKLQRENIMTPEIREELMCAKSNEELEFLYAPYKPASKGTLAERAKALGLQVYADCLL 311
            |:..:.|.|:::|..|:..:.:.|:..|:.||||.:.||||..||||.|:|||.|||:..|..||
Mouse   271 KKVHSRIQKIKKEGKMSECLLQALLNCKTFEELEHVSAPYKMGSKGTKAQRAKQLGLEGAAWTLL 335

  Fly   312 YGSAPKVNLSEIVDRRNEALATEALVMSGICQIIIHNISKNTNVLEEIRRLQNVHRVFLKCSKTK 376
            .... ::||...:....:.|:....:.:|:..|:...|:|:.:.|:.||.|.. ||..  |.:  
Mouse   336 ENPG-QLNLLSYIKPDVKGLSELNDIETGVQHILADMIAKDKDTLDFIRGLCK-HRYI--CIQ-- 394

  Fly   377 EAKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNFQGDVKTIKPYQMLAINRGEKHKWLSVK 441
                   ||.:|.||.|.:.:..|      ||:.|.||..:::||..:|:|||||||..|.|:||
Mouse   395 -------SSLAKVSSKKVNEKEVD------KFQLYQNFSCNIRTIHHHQILAINRGENLKILTVK 446

  Fly   442 IETNDYLKRDLMRY-ITDQYMNQGLQYPLRREVFTKSLEECYAKKLQPLMCRQIRAALKEKGTKA 505
            :..:|.:|.:..|: |.:::..:|...|...::...||::.:.:.:.||:||:.||.|.....|.
Mouse   447 VNISDGVKNEFCRWCIQNRWRPRGFARPELMKILHNSLDDSFKRLIVPLLCREFRAKLTSDAEKQ 511

  Fly   506 AIDVFAKNLKQLLLISPLKGERILGIDPGFINGCKLALISETADVLYTGVIYPHGAMSNKRAAEQ 570
            ::.:|.:||:||||.||:.|..::|:|||:.:|||||:||.|:.:|:|.|:|.|.....:.|  :
Mouse   512 SVMMFGQNLRQLLLTSPVPGRTLMGVDPGYKHGCKLAIISPTSQILHTDVVYLHCGQGFREA--E 574

  Fly   571 KLVQLLSDHNCKIIGLGNGTACRETEHWLTGMFHAGVLDSRIIRYSIVNENGASIYSCSNVAAKE 635
            |:.:||...||:.:.:||||||||||.:...:..........:.|.||:|.||||||.|..|.||
Mouse   575 KIKRLLLHFNCRTVVIGNGTACRETEAYFADLIMKNYFAPLDVVYCIVSEAGASIYSVSPEANKE 639

  Fly   636 FPKMDTNERSAVSIARRLNDPLSEYVKIEPRHLGVGMYQHDVPEKILTASLNDVVSECVSYVGVD 700
            .|.:|.|.|||||||||:.|||:|.||.:|:|:|||||||||.:.:|.|:|:.||.||||:||||
Mouse   640 MPGLDPNLRSAVSIARRVQDPLAELVKFDPKHIGVGMYQHDVSQTLLKATLDSVVEECVSFVGVD 704

  Fly   701 LNTASLSVLKHIAGLSEKKAEKIIEHRTQKGPFKTRKDLLSVRSIGEKSFVQCAGFVRIEPRSV- 764
            :|..|..:|:|||||:..:|:.|||.|.:.|||..|:.|..|:.:|.|||.||||||||....: 
Mouse   705 INICSEVLLRHIAGLNANRAKNIIEWREKNGPFINREQLKKVKGLGPKSFQQCAGFVRINQDYIR 769

  Fly   765 ---------GGQLQ-----------------------NPLDCTWVHPESYNVVE----------- 786
                     .||.|                       ||||.|.:|||||::..           
Mouse   770 TFCSQHTDSSGQSQETAMVTNEKLGKKKNKADATLIPNPLDQTCIHPESYDIAVSKRDTNFWSLY 834

  Fly   787 ------SIVGECDLKLSDVGKAAFIASIKQFASSQPNLDRIAKQHKLPMERLEFLLVALQRELLQ 845
                  |.:|.   .:.::||......| ..:..:..::..|::.:..:..|:.::..|.:....
Mouse   835 ILYWFLSFIGG---TMCEIGKPEMQQKI-NVSLGKEGIEETAERLQTTVHTLQVIIDGLSQPKTF 895

  Fly   846 DYRADLDKRPLFKQGLTRLDDLSMGEVVTGAVTNVTQFGAFVDVGVERNGLIHNSNMNNSQLS-- 908
            |.|.|.|| |.||:.:..|:||.:|.|:||.|.|.|.||.|||:||.:.|||....:..::||  
Mouse   896 DIRTDFDK-PDFKRSIVCLEDLQVGTVLTGKVENATLFGVFVDIGVGKAGLIPIRFITEAKLSKT 959

  Fly   909 ---------VGDRIVASVVKVDLKRRQLELRLENML 935
                     .|:::...|:.||:.|.::.|.|..:|
Mouse   960 KRRRSLGLGPGEKVEVKVLNVDIPRSRISLDLLRVL 995

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31156NP_651070.3 Tex 184..931 CDD:225094 298/808 (37%)
Tex_N 190..362 CDD:286460 64/171 (37%)
Tex_YqgF 527..653 CDD:293526 58/125 (46%)
HHH_3 697..758 CDD:289597 32/60 (53%)
S1_like 870..930 CDD:299122 24/70 (34%)
Srbd1XP_011245030.1 TFIIF_alpha <9..186 CDD:310411 40/156 (26%)
Tex 205..992 CDD:225094 300/827 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847271
Domainoid 1 1.000 114 1.000 Domainoid score I6088
eggNOG 1 0.900 - - E1_COG2183
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9994
Inparanoid 1 1.050 504 1.000 Inparanoid score I1339
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG62824
OrthoDB 1 1.010 - - D56990at2759
OrthoFinder 1 1.000 - - FOG0006115
OrthoInspector 1 1.000 - - oto92044
orthoMCL 1 0.900 - - OOG6_104871
Panther 1 1.100 - - LDO PTHR10724
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R4297
SonicParanoid 1 1.000 - - X5053
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.800

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