DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG31156 and Supt6h

DIOPT Version :9

Sequence 1:NP_651070.3 Gene:CG31156 / 42669 FlyBaseID:FBgn0051156 Length:948 Species:Drosophila melanogaster
Sequence 2:NP_001178749.1 Gene:Supt6h / 303281 RGDID:1309290 Length:1726 Species:Rattus norvegicus


Alignment Length:1213 Identity:240/1213 - (19%)
Similarity:416/1213 - (34%) Gaps:420/1213 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 SDSDEEVNLTADDDYRPEETKSRIIDRAADAQTVVTKRQRFPTSKKTAAEGPAPKKKRGDKEKAD 83
            ::.|||  |..|.:|..:|.:..|..|                .|||.       |||..:....
  Rat   230 NEYDEE--LEEDYEYEDDEAEGEIRVR----------------PKKTT-------KKRVSRRSIF 269

  Fly    84 ENACPNENNPESVVQDTPSTSNQRNGAVGTEHNSEAPAPKRKRARKDKEDLKTAANETNPEKGDV 148
            |...|:|       .::...::|.|....|:      .|:|.:.|  ...:|.|.::...|:.|.
  Rat   270 EMYEPSE-------LESSHLTDQDNEIRATD------LPERFQLR--SIPVKAAEDDELEEEADW 319

  Fly   149 VPSTAVTQPNDIVASSSHNKSSTGR--SSFWERRK----VWNIDELLAETESIQPQAARNIVKLF 207
            :...|...|. |....|.:....|:  |||  .||    |..|.|.|.        ..||  :.|
  Rat   320 IYRNAFATPT-ISLQDSCDYLDRGQPTSSF--SRKGPSTVQKIKEALG--------FMRN--QHF 371

  Fly   208 EDENTIPFICRYRRDLVDHIAPD-RLRDIRNTY---TEIVDLRKRAENI------IGKLQRENI- 261
            |    :|||..||::.|:   |: .:.|:...:   .:...||.|.||:      :...|.|.| 
  Rat   372 E----VPFIAFYRKEYVE---PELHINDLWRVWQWDEKWTQLRIRKENLTRLFEKMQAYQYEQIS 429

  Fly   262 ------MTPEIR-------EELMCAKSNEELEFLYAPY--------------------------- 286
                  :...||       |.|...:|.:||:.:|..:                           
  Rat   430 ADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRIKE 494

  Fly   287 ---------------------KPASKGTLAERAKALGLQVYADCLLYGSAPK---VNLSEIVDR- 326
                                 |.||:..:....::.||...|.  .:|..|:   .||.:...| 
  Rat   495 DGDEEGEGEEAEDEEQRGPELKQASRRDMYTICQSAGLDGLAK--KFGLTPEQFGENLRDSYQRH 557

  Fly   327 RNEALATEAL----------------VMSGICQIIIHNISKNTNVLEEIRRLQNVHRVFLKCSKT 375
            ..|....|.|                |:.|...::...|::...|.:.:|:... .|..|..:.|
  Rat   558 ETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQ-ERAKLNITPT 621

  Fly   376 KEAKSSKSSSSSKASSSKGSNQNADKKLDSSKFENYFNF--QGDVKTIKPYQMLAINRGEKHKWL 438
            |:.:                     |.:|.:.:...|.:  ...||.::..|.|.|...|....|
  Rat   622 KKGR---------------------KDVDEAHYAYSFKYLKNKPVKELRDDQFLKIGLAEDEGLL 665

  Fly   439 SVKIET---------ND--YLKRDLMRYITDQYMNQGLQYPLRREVFTKSLEECYAKKLQPLMCR 492
            ::.|..         ||  |.:.....|..|::.:|..::..:|   |.::|....:.|...|.:
  Rat   666 TIDISIDMKGVEGYGNDQTYFEEIKQFYYRDEFSHQVQEWNRQR---TMAIERALQQFLYVQMAK 727

  Fly   493 QIRAALKEKGTKAAIDVFAKNLKQLLLISPL------------------KGERILGI-------D 532
            :::..|..:..::.:...::.|...|.::|.                  ||.|:|||       .
  Rat   728 ELKNKLLAEARESVVKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDH 792

  Fly   533 PGF---INGCKLALISETADVLYTGVIYPHGA------------------------MSNKR---- 566
            |.|   :||     ..|..|.|.    .||..                        :.||:    
  Rat   793 PVFCALVNG-----EGEVTDFLR----LPHFTKRRTAWREEEREKKAQDIETLKKFLVNKKPHVV 848

  Fly   567 --AAEQKLVQLLSDHNCKIIGLGNGTACRETEHWLTGMFHAGVLDSRIIRYSIVNENGASIYSCS 629
              |.|.:..|:|.:...:|:            |.|.   ....|.|  |...:|:...|.:|..|
  Rat   849 TVAGENRDAQMLIEDVKRIV------------HELD---QGQQLSS--IGVELVDNELAILYMNS 896

  Fly   630 NVAAKEFPKMDTNERSAVSIARRLNDPLSEY------------VKIEPRHLGVGMYQHDVPEKIL 682
            ..:..||.......|.|||:|||:.|||.|:            :|..|      :.:|.|.|::|
  Rat   897 KKSEAEFRDYPPVLRQAVSLARRIQDPLIEFAQVCSSDEDILCLKFHP------LQEHVVKEELL 955

  Fly   683 TASLNDVVSECVSYVGVDLNTA-----SLSVLKHIAGLSEKKAEKIIEHRTQKGP-FKTRKDLLS 741
            .|...:.::. |:.||||:|.|     |.::::::.||..:|...:::...|... .::|..|::
  Rat   956 NALYCEFINR-VNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVT 1019

  Fly   742 VRSIGEKSFVQCAGFVRIEPRSVGGQLQN---PLDCTWVHPESYN-----VVESIVGECDLKLSD 798
            :..:|.|.|:.||||::|:..|:|....:   .||.:.||||:|.     .|:::  |.|....|
  Rat  1020 MCHMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDAL--EYDESAED 1082

  Fly   799 VGKAAFIASIKQFASSQPNLDRIAKQHKLPMERLEFLLVALQRE-------LLQDYRADL----- 851
            ...|..:..|.:......:||            |:.....|:|:       .|.|.||:|     
  Rat  1083 ANPAGALEEILENPERLKDLD------------LDAFAEELERQGYGDKHITLYDIRAELSCRYK 1135

  Fly   852 DKRPLFKQGLTR----------LDDLSMGEVVTGAVTNVT----------------QFGAF---- 886
            |.|..::...|.          .:...:|:::...||.:.                :.|.:    
  Rat  1136 DLRTAYRSPNTEEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPF 1200

  Fly   887 -------------------------------VDVGVERNGLIHNSNMNN-------SQLSVGDRI 913
                                           :|.||  .|.|....:::       .::.||..:
  Rat  1201 CQQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGV--TGFIPTKFLSDKVVKRPEERVKVGMTV 1263

  Fly   914 VASVVKVDLKRRQLEL--RLENML-------METDTSFKFKAE 947
            ...::|:|:::...:|  |..:::       :..||.:.|.||
  Rat  1264 HCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAE 1306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG31156NP_651070.3 Tex 184..931 CDD:225094 195/1017 (19%)
Tex_N 190..362 CDD:286460 47/263 (18%)
Tex_YqgF 527..653 CDD:293526 37/165 (22%)
HHH_3 697..758 CDD:289597 20/66 (30%)
S1_like 870..930 CDD:299122 14/119 (12%)
Supt6hNP_001178749.1 HTH_44 <348..422 CDD:291314 24/92 (26%)
Tex 372..1353 CDD:225094 195/1018 (19%)
Tex_N <565..623 CDD:286460 10/58 (17%)
YqgF 775..931 CDD:258777 44/181 (24%)
HHH_7 935..1038 CDD:291309 28/109 (26%)
DLD 1053..1157 CDD:291540 26/117 (22%)
S1 <1227..1282 CDD:197648 10/56 (18%)
SH2_2 1304..1514 CDD:291307 2/3 (67%)
SH2_Nterm_SPT6_like 1331..1415 CDD:198174
SH2_Cterm_SPT6_like 1424..1515 CDD:198182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2183
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D56990at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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