DRSC/TRiP Functional Genomics Resources

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Protein Alignment Efa6 and psd

DIOPT Version :10

Sequence 1:NP_001163691.2 Gene:Efa6 / 42665 FlyBaseID:FBgn0051158 Length:1601 Species:Drosophila melanogaster
Sequence 2:XP_031762195.1 Gene:psd / 100497998 XenbaseID:XB-GENE-6467347 Length:1174 Species:Xenopus tropicalis


Alignment Length:1406 Identity:368/1406 - (26%)
Similarity:562/1406 - (39%) Gaps:441/1406 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   328 YMMTGDLILNLSRTPQTSNPLPAQAKKIDSLRDSPSRLVNPRINGALA-PRASGESSPTS----- 386
            |..||.|:.|.|.|...|..:.|....:.|..:.|  |.:|.....|. |:..|:||..:     
 Frog    76 YNSTGSLVCNPSETVYKSGRVTAPCSPLRSRENDP--LYSPGSRKPLVLPQNLGQSSIVTFTFVK 138

  Fly   387 SSSVDSPTNTSS--DSVKREAKLLQKQQQQQQQTYQQQQQRDSINNSYNRKDSLTNDTLLMCEE- 448
            .|||.:....|:  ||               .|..||:|:.|.....||::...:     :|.| 
 Frog   139 KSSVQTLNGVSTLCDS---------------DQDKQQRQEEDQRGPCYNKEKESS-----ICLEK 183

  Fly   449 --LEPDEEGEYVLEEDNKQ------QRQRQQQQRYRQQQNQQRYEYYQNEDELEEQEEVEEEREE 505
              :.||......|:..:.|      .|.|.|......|..|::|                     
 Frog   184 SAVNPDCISNTELKVGSPQLKLASHSRDRTQLACNSPQTGQRKY--------------------- 227

  Fly   506 DQTHYDITNIETYQSGVGRGDDDDSDRQCLVDDDDDDDAYDDEENDAGDEDYSTNS-LGSGSAKQ 569
             .:.:.|      ||.......|.:..|.:    .....||..:|.:.|...|||| |.:.|..|
 Frog   228 -HSEFGI------QSPSSASSQDFNLNQSV----SSSSQYDCSKNLSLDLKSSTNSPLKTSSPSQ 281

  Fly   570 RLRALKQRTATRQQQRN--RDAVDCAGRSGSGSSSTTVKS--------EAGGLGL---------- 614
              ..|.:|.|   ..||  :|.:..:.:..:..||::|:|        :|...|.          
 Frog   282 --SPLLRRLA---NDRNACKDHITSSIQETNEESSSSVRSPRKSEPNQQADPWGFPKEVSLHAQK 341

  Fly   615 --------------------DETS-FSVPTSP----------ISLSTPL---------IDKETAN 639
                                ::|. .|.|.||          ....|.|         ::.||.:
 Frog   342 IAKAKWEFFYGSTDSQKEDSEQTEILSTPCSPNASGSLEKRHCHQETDLLKHNLCHVEVEIETTS 406

  Fly   640 SVPTSPEPSSLVPESSSGAGAGAVVVRRHNGHVVRKCDAAGFRTSKSEDHLQQIQREGIAAVIPI 704
            ||  .|:|.|    ..:|      ::||...:.....|:...|..: |.::..|..|        
 Frog   407 SV--DPKPDS----CETG------IIRRTIKYSETDLDSVPLRCYR-ETNIDDILAE-------- 450

  Fly   705 DIDEDVNSSLNTLLDTRQDSEDSQSMATVIVNNSSLASNNNEGEQTDNRSSSSSSNSSDNNNCSS 769
                  |..|::.:.:::|||.         |..:.|...||    .|..::..:|....||...
 Frog   451 ------NEGLDSAIGSQKDSES---------NTETSAEKTNE----QNEQTTVENNRVFANNPGR 496

  Fly   770 NTGEPATSETATATATIITATSTRTMNCSSKLNYILCKKASDRDRIVWTYNAPLQPHQLAALQRQ 834
            :.||....|...||....|......:...:.|.::||                   |:|:     
 Frog   497 DNGEEDEDEVFEATKVGETNRVNAQLPIKTPLPFLLC-------------------HRLS----- 537

  Fly   835 QQQQEQQFQQQQQQLHQQHLQQQQQLQQQHQQQQQQQQQQQQQQLYGQQSHSNSHSSSISSSP-- 897
             :.....|.:..:.:.:.|..:                         ..|:|:..|..|.|||  
 Frog   538 -EDGMDSFSKHFENIMESHRAK-------------------------GTSYSSLDSIDILSSPAQ 576

  Fly   898 -QHS--AVGSPASPTSVSSSVMSSSGSKGALGLGSSSNGPMAAVQQQQLREREQGGQVAQPPSGI 959
             |||  ....|...:.....:..::      .|...:..|:|.::...                 
 Frog   577 NQHSFFTFDLPTLTSETQKQICKNA------QLIEDNFAPLAHLELDS----------------- 618

  Fly   960 PGLLSCPGGGCGNNGGGGGIGGGGNNDQSVSEAISNISSPDYQDDDNLLSSRDILGGM--VLSDP 1022
                                |.....|.:.||          ::||.:    :..|..  .|..|
 Frog   619 --------------------GTSSTTDSAWSE----------REDDTV----NAAGATNNALRSP 649

  Fly  1023 SDSDSTILVSDAAAHQRQQLKQQLRAQQQQQRERERDRDRDREQSEHKVVIQVRGLDSNSSGGNG 1087
            :.|:.:::::||                                     :||             
 Frog   650 TQSEDSLIIADA-------------------------------------IIQ------------- 664

  Fly  1088 TNGRSEEDVVTLTDEPLGTMTVGMRDASPPVSDDGSDVES-----------LHSYHYSPKAVDMP 1141
                        ::.|||.:          .|:..|:::|           |.:.|   || |..
 Frog   665 ------------SEPPLGNL----------ASEFDSEMDSTERLALGSTDTLSNGH---KA-DQE 703

  Fly  1142 SAIRLAKRLHSLDGFKKSDVSRHLSKN--NDFSRAVADEYLKHFTFEKKSLDQALREFLQQFSLS 1204
            :|.||||||::||||||:||:|||.|.  |:||:.||:||||.|.|...|||||||.||::.:|.
 Frog   704 AAKRLAKRLYNLDGFKKADVARHLGKKYVNEFSKMVAEEYLKFFVFTGMSLDQALRMFLKELALM 768

  Fly  1205 GETQERERVLVHFSKRFLDCNPGTFNSQDAVHTLTCAIMLLNTDLHGQNINRKMSCAEFVDNLAD 1269
            ||||||||:|.|||:|:..||..:..|:|.|||||||:|||||||||.||.::|||:||:.||..
 Frog   769 GETQERERILAHFSQRYHQCNSNSITSEDGVHTLTCALMLLNTDLHGHNIGKRMSCSEFIGNLEG 833

  Fly  1270 LNDGENFPKDVLKSLYQAIKTKPLEWALDEEAGDLQQ-------------QRANNSALGNVGLNP 1321
            ||.|::||:::||:||.:||.:.|:|.:|||  :|::             :|.|:..      .|
 Frog   834 LNGGKDFPRELLKALYSSIKNEKLQWTIDEE--ELRRSLSELADPNPKSIKRINSCG------KP 890

  Fly  1322 FLD---PPELATAVEYKKGYVMRKCCYDSSFKKTPFGKRSWKMFYCTLRDLVLYLHKDEHGFRKS 1383
            |||   .|.:.|   ||.|.::||...|...||||.|||.||.|:..|:.::|||.|:|:...|.
 Frog   891 FLDFSQDPNITT---YKYGVLVRKTHADPDCKKTPRGKRGWKTFHGILKGMILYLQKEEYKPGKP 952

  Fly  1384 QMSDNLHNAIRIHHALATKANDYTKKQHVFRLQTADQAEYLFQTSDSKELQSWVETINYVCAAIS 1448
            ...::|.|||.|||:|||:|:||.|:.:||.|:|||...:|||..:.:::.||:..||.|.|..|
 Frog   953 LSEEDLKNAISIHHSLATRASDYNKRPNVFYLRTADWRVFLFQAQNPEQMHSWITRINVVAAMFS 1017

  Fly  1449 APPLEGGVGSQKRFQRPLLPSKQSKLMLKEQLDSHEVQLAQLDQELNEHKKGPIPS---KGLALQ 1510
            |||....:||.|:|.||||||..::|..:||:.:||.:...:...|.||:..| |.   ||..::
 Frog  1018 APPFPAAIGSYKKFSRPLLPSSITRLSQEEQVKTHESKFKTMSSSLIEHRSSP-PDKKIKGKEIE 1081

  Fly  1511 NYKEKESYLQYELRRYRTYVSILSAKMLADQQQLE----------------LQAQQPSPASHEEE 1559
            .:|:||.||::|..||.||..:|.||:.|..:.||                |:..:.||:.:.: 
 Frog  1082 EFKQKEDYLEFEKSRYGTYAMLLRAKLKAGTEDLEAFETTLFDSAENDDDGLKKSRSSPSLNID- 1145

  Fly  1560 ADTFPVGTTACTPPTPQSINQKDQQKEQQQQQPTNRKEKKK 1600
                         |.|.|...|.....:...:|.:...::|
 Frog  1146 -------------PPPASTKAKCHVSSRGSCRPAHSSSRQK 1173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Efa6NP_001163691.2 PDZ_canonical 6..85 CDD:467153
PHA03269 225..>344 CDD:165527 7/15 (47%)
Sec7 1124..1293 CDD:238100 99/181 (55%)
PH_EFA6 1330..1452 CDD:270107 56/121 (46%)
psdXP_031762195.1 Sec7 701..857 CDD:238100 94/155 (61%)
PH_EFA6 897..1022 CDD:270107 58/127 (46%)
Blue background indicates that the domain is not in the aligned region.

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